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CTSLP2 (cathepsin L pseudogene 2)

Identity

Alias (NCBI)CTSL1P2
CTSL1P5
CTSL1P7
CTSLL2
CTSLL5
CTSLL7
CTSLP5
CTSLP7
bA144G6.6
bA342C24.4
HGNC (Hugo) CTSLP2
HGNC Alias symbbA342C24.4
bA144G6.6
HGNC Previous nameCTSLL2
 CTSL1P2
 CTSLP5
 CTSLL5
 CTSL1P5
 CTSLP7
 CTSLL7
 CTSL1P7
HGNC Previous namecathepsin L-like 2
 cathepsin L1 pseudogene 2
 cathepsin L pseudogene 5
 cathepsin L-like 5
 cathepsin L1 pseudogene 5
 cathepsin L pseudogene 7
 cathepsin L-like 7
 cathepsin L1 pseudogene 7
LocusID (NCBI) 1517
Atlas_Id 62191
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 47580671 and ends at 47583419 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CTSLP2   2540
Cards
Entrez_Gene (NCBI)CTSLP2    cathepsin L pseudogene 2
AliasesCTSL1P2; CTSL1P5; CTSL1P7; CTSLL2; 
CTSLL5; CTSLL7; CTSLP5; CTSLP7; bA144G6.6; bA342C24.4
GeneCards (Weizmann)CTSLP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr10:47580671-47583419 [Contig_View]  CTSLP2 [Vega]
TCGA cBioPortalCTSLP2
AceView (NCBI)CTSLP2
Genatlas (Paris)CTSLP2
SOURCE (Princeton)CTSLP2
Genetics Home Reference (NIH)CTSLP2
Genomic and cartography
GoldenPath hg38 (UCSC)CTSLP2  -     chr10:47580671-47583419 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTSLP2  -     10q11.22   [Description]    (hg19-Feb_2009)
GoldenPathCTSLP2 - 10q11.22 [CytoView hg19]  CTSLP2 - 10q11.22 [CytoView hg38]
Genome Data Viewer NCBICTSLP2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK309109 L25628
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)CTSLP2
Gene ExpressionCTSLP2 [ NCBI-GEO ]   CTSLP2 [ EBI - ARRAY_EXPRESS ]   CTSLP2 [ SEEK ]   CTSLP2 [ MEM ]
Gene Expression Viewer (FireBrowse)CTSLP2 [ Firebrowse - Broad ]
GenevisibleExpression of CTSLP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1517
GTEX Portal (Tissue expression)CTSLP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTSLP2
Protein Interaction databases
BioGRIDCTSLP2
STRING (EMBL)CTSLP2
ZODIACCTSLP2
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCTSLP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:47:05 CEST 2021

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