Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CTSLP2 (cathepsin L pseudogene 2)

Identity

Alias_namesCTSLL2
CTSL1P2
CTSLP5
CTSLL5
CTSL1P5
CTSLP7
CTSLL7
CTSL1P7
cathepsin L-like 2
cathepsin L1 pseudogene 2
cathepsin L pseudogene 5
cathepsin L-like 5
cathepsin L1 pseudogene 5
cathepsin L pseudogene 7
cathepsin L-like 7
cathepsin L1 pseudogene 7
Alias_symbol (synonym)bA342C24.4
bA144G6.6
Other alias
HGNC (Hugo) CTSLP2
LocusID (NCBI) 1517
Atlas_Id 62191
Location 10q11.22  [Link to chromosome band 10q11]
Location_base_pair Starts at 47580671 and ends at 47583419 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CTSLP2   2540
Cards
Entrez_Gene (NCBI)CTSLP2  1517  cathepsin L pseudogene 2
AliasesCTSL1P2; CTSL1P5; CTSL1P7; CTSLL2; 
CTSLL5; CTSLL7; CTSLP5; CTSLP7; bA144G6.6; bA342C24.4
GeneCards (Weizmann)CTSLP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:47580671-47583419 [Contig_View]  CTSLP2 [Vega]
TCGA cBioPortalCTSLP2
AceView (NCBI)CTSLP2
Genatlas (Paris)CTSLP2
WikiGenes1517
SOURCE (Princeton)CTSLP2
Genetics Home Reference (NIH)CTSLP2
Genomic and cartography
GoldenPath hg38 (UCSC)CTSLP2  -     chr10:47580671-47583419 -  10q11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CTSLP2  -     10q11.22   [Description]    (hg19-Feb_2009)
EnsemblCTSLP2 - 10q11.22 [CytoView hg19]  CTSLP2 - 10q11.22 [CytoView hg38]
Mapping of homologs : NCBICTSLP2 [Mapview hg19]  CTSLP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK309109 L25628
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CTSLP2
Cluster EST : UnigeneHs.568350 [ NCBI ]
CGAP (NCI)Hs.568350
Gene ExpressionCTSLP2 [ NCBI-GEO ]   CTSLP2 [ EBI - ARRAY_EXPRESS ]   CTSLP2 [ SEEK ]   CTSLP2 [ MEM ]
Gene Expression Viewer (FireBrowse)CTSLP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)1517
GTEX Portal (Tissue expression)CTSLP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CTSLP2
DMDM Disease mutations1517
Blocks (Seattle)CTSLP2
IPIIPI00976326   
Protein Interaction databases
BioGRIDCTSLP2
STRING (EMBL)CTSLP2
ZODIACCTSLP2
Ontologies - Pathways
Huge Navigator CTSLP2 [HugePedia]
snp3D : Map Gene to Disease1517
BioCentury BCIQCTSLP2
ClinGenCTSLP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1517
Chemical/Pharm GKB GenePA27038
Clinical trialCTSLP2
Miscellaneous
canSAR (ICR)CTSLP2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCTSLP2
EVEXCTSLP2
GoPubMedCTSLP2
iHOPCTSLP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:36 CEST 2017

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