Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CUEDC2 (CUE domain containing 2)

Identity

Alias (NCBI)C10orf66
bA18I14.5
HGNC (Hugo) CUEDC2
HGNC Alias symbMGC2491
HGNC Previous nameC10orf66
HGNC Previous namechromosome 10 open reading frame 66
LocusID (NCBI) 79004
Atlas_Id 47645
Location 10q24.32  [Link to chromosome band 10q24]
Location_base_pair Starts at 102423249 and ends at 102432574 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CUEDC2 (10q24.32) / TRAF3IP2-AS1 (6q21)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CUEDC2   28352
Cards
Entrez_Gene (NCBI)CUEDC2    CUE domain containing 2
AliasesC10orf66; bA18I14.5
GeneCards (Weizmann)CUEDC2
Ensembl hg19 (Hinxton)ENSG00000107874 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000107874 [Gene_View]  ENSG00000107874 [Sequence]  chr10:102423249-102432574 [Contig_View]  CUEDC2 [Vega]
ICGC DataPortalENSG00000107874
TCGA cBioPortalCUEDC2
AceView (NCBI)CUEDC2
Genatlas (Paris)CUEDC2
SOURCE (Princeton)CUEDC2
Genetics Home Reference (NIH)CUEDC2
Genomic and cartography
GoldenPath hg38 (UCSC)CUEDC2  -     chr10:102423249-102432574 -  10q24.32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CUEDC2  -     10q24.32   [Description]    (hg19-Feb_2009)
GoldenPathCUEDC2 - 10q24.32 [CytoView hg19]  CUEDC2 - 10q24.32 [CytoView hg38]
ImmunoBaseENSG00000107874
Genome Data Viewer NCBICUEDC2 [Mapview hg19]  
OMIM614142   
Gene and transcription
Genbank (Entrez)AB025425 AB232358 AF086406 BC000262 BF002772
RefSeq transcript (Entrez)NM_024040
Consensus coding sequences : CCDS (NCBI)CUEDC2
Gene ExpressionCUEDC2 [ NCBI-GEO ]   CUEDC2 [ EBI - ARRAY_EXPRESS ]   CUEDC2 [ SEEK ]   CUEDC2 [ MEM ]
Gene Expression Viewer (FireBrowse)CUEDC2 [ Firebrowse - Broad ]
GenevisibleExpression of CUEDC2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79004
GTEX Portal (Tissue expression)CUEDC2
Human Protein AtlasENSG00000107874-CUEDC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H467   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H467  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H467
PhosPhoSitePlusQ9H467
Domaine pattern : Prosite (Expaxy)CUE (PS51140)   
Domains : Interpro (EBI)CUE    CUE_CUED2    CUEDC2   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CUEDC2
SuperfamilyQ9H467
AlphaFold pdb e-kbQ9H467   
Human Protein Atlas [tissue]ENSG00000107874-CUEDC2 [tissue]
HPRD13099
Protein Interaction databases
DIP (DOE-UCLA)Q9H467
IntAct (EBI)Q9H467
BioGRIDCUEDC2
STRING (EMBL)CUEDC2
ZODIACCUEDC2
Ontologies - Pathways
QuickGOQ9H467
Ontology : AmiGOprotein binding  nucleoplasm  cytosol  negative regulation of macrophage cytokine production  nuclear membrane  ubiquitin binding  negative regulation of cytokine production involved in inflammatory response  
Ontology : EGO-EBIprotein binding  nucleoplasm  cytosol  negative regulation of macrophage cytokine production  nuclear membrane  ubiquitin binding  negative regulation of cytokine production involved in inflammatory response  
NDEx NetworkCUEDC2
Atlas of Cancer Signalling NetworkCUEDC2
Wikipedia pathwaysCUEDC2
Orthology - Evolution
OrthoDB79004
GeneTree (enSembl)ENSG00000107874
Phylogenetic Trees/Animal Genes : TreeFamCUEDC2
Homologs : HomoloGeneCUEDC2
Homology/Alignments : Family Browser (UCSC)CUEDC2
Gene fusions - Rearrangements
Fusion : QuiverCUEDC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCUEDC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CUEDC2
dbVarCUEDC2
ClinVarCUEDC2
MonarchCUEDC2
1000_GenomesCUEDC2 
Exome Variant ServerCUEDC2
GNOMAD BrowserENSG00000107874
Varsome BrowserCUEDC2
ACMGCUEDC2 variants
VarityQ9H467
Genomic Variants (DGV)CUEDC2 [DGVbeta]
DECIPHERCUEDC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCUEDC2 
Mutations
ICGC Data PortalCUEDC2 
TCGA Data PortalCUEDC2 
Broad Tumor PortalCUEDC2
OASIS PortalCUEDC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCUEDC2  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCUEDC2
Mutations and Diseases : HGMDCUEDC2
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCUEDC2
DgiDB (Drug Gene Interaction Database)CUEDC2
DoCM (Curated mutations)CUEDC2
CIViC (Clinical Interpretations of Variants in Cancer)CUEDC2
Cancer3DCUEDC2
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614142   
Orphanet
DisGeNETCUEDC2
MedgenCUEDC2
Genetic Testing Registry CUEDC2
NextProtQ9H467 [Medical]
GENETestsCUEDC2
Target ValidationCUEDC2
Huge Navigator CUEDC2 [HugePedia]
ClinGenCUEDC2
Clinical trials, drugs, therapy
MyCancerGenomeCUEDC2
Protein Interactions : CTDCUEDC2
Pharm GKB GenePA134871975
PharosQ9H467
Clinical trialCUEDC2
Miscellaneous
canSAR (ICR)CUEDC2
HarmonizomeCUEDC2
DataMed IndexCUEDC2
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCUEDC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:05:42 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.