CUGBP2 (CUG triplet repeat, RNA binding protein 2)

Identity

Other names	BRUNOL3
	ETR-3
	NAPOR
HGNC	CUGBP2
Location	10p13
Location_base_pair	Starts at 11246999 and ends at 11418678 bp from pter (hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CUGBP2   2550
Entrez_Gene	CUGBP2  10659  CUG triplet repeat, RNA binding protein 2
	Cards
GeneCards	CUGBP2
Ensembl	CUGBP2 [Search_View]   ENSG00000048740 [Gene_View]
Genatlas	CUGBP2
GeneLynx	CUGBP2
eGenome	CUGBP2
euGene	10659
	Genomic and cartography
GoldenPath	CUGBP2  -  10p13   chr10:11246999-11418678 +  10p14   [Description]    (hg18-March_2006)
Ensembl	CUGBP2 - 10p14 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CUGBP2
	Gene and transcription
Genbank	AA595891 [ ENTREZ ]
Genbank	AF036956 [ ENTREZ ]
Genbank	AF090693 [ ENTREZ ]
Genbank	AF090694 [ ENTREZ ]
Genbank	AF432906 [ ENTREZ ]
RefSeq	NM_001025076 [ SRS ]    NM_001025076 [ ENTREZ ]
RefSeq	NM_001025077 [ SRS ]    NM_001025077 [ ENTREZ ]
RefSeq	NM_001083591 [ SRS ]    NM_001083591 [ ENTREZ ]
RefSeq	NM_006561 [ SRS ]    NM_006561 [ ENTREZ ]
RefSeq	AC_000053 [ SRS ]    AC_000053 [ ENTREZ ]
RefSeq	AC_000142 [ SRS ]    AC_000142 [ ENTREZ ]
RefSeq	NC_000010 [ SRS ]    NC_000010 [ ENTREZ ]
RefSeq	NT_077569 [ SRS ]    NT_077569 [ ENTREZ ]
RefSeq	NW_001837931 [ SRS ]    NW_001837931 [ ENTREZ ]
RefSeq	NW_924584 [ SRS ]    NW_924584 [ ENTREZ ]
AceView	CUGBP2 AceView - NCBI
Unigene	Hs.309288 [ SRS ]    Hs.309288 [ NCBI ]     HS309288 [ spliceNest ]
Fast-db	2375 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	O95319 [ SRS]    O95319 [ EXPASY ]     O95319 [ INTERPRO ]     O95319 [ UNIPROT ]
Prosite	PS50102 RRM [ SRS ]    PS50102 RRM [ Expasy ]
Interpro	IPR012677 a_b_plait_nuc_bd [ SRS ]    IPR012677 a_b_plait_nuc_bd [ EBI ]
Interpro	IPR002343 Hud_Sxl_RNA [ SRS ]    IPR002343 Hud_Sxl_RNA [ EBI ]
Interpro	IPR015903 RNP_BRUNO-like [ SRS ]    IPR015903 RNP_BRUNO-like [ EBI ]
Interpro	IPR000504 RRM_RNP1 [ SRS ]    IPR000504 RRM_RNP1 [ EBI ]
CluSTr	O95319
Pfam	PF00076 RRM_1 [ SRS ]    PF00076 RRM_1 [ Sanger ]    pfam00076 [ NCBI-CDD ]
Smart	SM00360 RRM [EMBL]
Blocks	O95319
HPRD	03964
	Protein Interaction databases
DIP	O95319
IntAct	O95319
	Polymorphism : SNP, mutations, diseases
OMIM	602538    [ map ]
GENECLINICS	602538
SNP	CUGBP2 [dbSNP-NCBI]
SNP	NM_001025076 [SNP-NCI]
SNP	NM_001025077 [SNP-NCI]
SNP	NM_001083591 [SNP-NCI]
SNP	NM_006561 [SNP-NCI]
SNP	CUGBP2 [GeneSNPs - Utah]  CUGBP2] [HGBASE - SRS]
HAPMAP	CUGBP2 [HAPMAP]
HGMD	CUGBP2
	General knowledge
Family Browser	CUGBP2 [UCSC Family Browser]
SOURCE	NM_001025076
SOURCE	NM_001025077
SOURCE	NM_001083591
SOURCE	NM_006561
SMD	Hs.309288
SAGE	Hs.309288
GO	nucleotide binding [Amigo]  nucleotide binding
GO	RNA binding [Amigo]  RNA binding
GO	nucleus [Amigo]  nucleus
GO	cytoplasm [Amigo]  cytoplasm
GO	mRNA processing [Amigo]  mRNA processing
GO	regulation of heart contraction [Amigo]  regulation of heart contraction
PubGene	CUGBP2
TreeFam	CUGBP2
CTD	10659 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CUGBP2 Related clones (RZPD - Berlin)
	PubMed
PubMed	24 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Sat Oct 11 13:09:12 2008