Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CUTC (cutC copper transporter)

Identity

Alias (NCBI)CGI-32
HGNC (Hugo) CUTC
HGNC Alias symbCGI-32
HGNC Previous namecutC copper transporter homolog (E. coli)
LocusID (NCBI) 51076
Atlas_Id 62204
Location 10q24.2  [Link to chromosome band 10q24]
Location_base_pair Starts at 99732234 and ends at 99756134 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CUTC (10q24.2) / C19orf57 (19p13.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CUTC   24271
Cards
Entrez_Gene (NCBI)CUTC    cutC copper transporter
AliasesCGI-32
GeneCards (Weizmann)CUTC
Ensembl hg19 (Hinxton)ENSG00000119929 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000119929 [Gene_View]  ENSG00000119929 [Sequence]  chr10:99732234-99756134 [Contig_View]  CUTC [Vega]
ICGC DataPortalENSG00000119929
TCGA cBioPortalCUTC
AceView (NCBI)CUTC
Genatlas (Paris)CUTC
SOURCE (Princeton)CUTC
Genetics Home Reference (NIH)CUTC
Genomic and cartography
GoldenPath hg38 (UCSC)CUTC  -     chr10:99732234-99756134 +  10q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CUTC  -     10q24.2   [Description]    (hg19-Feb_2009)
GoldenPathCUTC - 10q24.2 [CytoView hg19]  CUTC - 10q24.2 [CytoView hg38]
ImmunoBaseENSG00000119929
Genome Data Viewer NCBICUTC [Mapview hg19]  
OMIM610101   
Gene and transcription
Genbank (Entrez)AF132966 AK001142 AK302507 AK314687 BC011016
RefSeq transcript (Entrez)NM_015960
Consensus coding sequences : CCDS (NCBI)CUTC
Gene ExpressionCUTC [ NCBI-GEO ]   CUTC [ EBI - ARRAY_EXPRESS ]   CUTC [ SEEK ]   CUTC [ MEM ]
Gene Expression Viewer (FireBrowse)CUTC [ Firebrowse - Broad ]
GenevisibleExpression of CUTC in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51076
GTEX Portal (Tissue expression)CUTC
Human Protein AtlasENSG00000119929-CUTC [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NTM9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NTM9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NTM9
PhosPhoSitePlusQ9NTM9
Domains : Interpro (EBI)Cu_homeostasis_CutC    Cu_homeostasis_CutC_dom    CutC_dom_sf   
Domain families : Pfam (Sanger)CutC (PF03932)   
Domain families : Pfam (NCBI)pfam03932   
Conserved Domain (NCBI)CUTC
PDB (RSDB)3IWP   
PDB Europe3IWP   
PDB (PDBSum)3IWP   
PDB (IMB)3IWP   
Structural Biology KnowledgeBase3IWP   
SCOP (Structural Classification of Proteins)3IWP   
CATH (Classification of proteins structures)3IWP   
SuperfamilyQ9NTM9
AlphaFold pdb e-kbQ9NTM9   
Human Protein Atlas [tissue]ENSG00000119929-CUTC [tissue]
HPRD13100
Protein Interaction databases
DIP (DOE-UCLA)Q9NTM9
IntAct (EBI)Q9NTM9
BioGRIDCUTC
STRING (EMBL)CUTC
ZODIACCUTC
Ontologies - Pathways
QuickGOQ9NTM9
Ontology : AmiGOcopper ion binding  copper ion binding  copper ion binding  protein binding  nucleus  nucleus  nucleoplasm  nucleolus  cytoplasm  cytosol  copper ion transport  protein tetramerization  copper ion homeostasis  copper ion homeostasis  
Ontology : EGO-EBIcopper ion binding  copper ion binding  copper ion binding  protein binding  nucleus  nucleus  nucleoplasm  nucleolus  cytoplasm  cytosol  copper ion transport  protein tetramerization  copper ion homeostasis  copper ion homeostasis  
NDEx NetworkCUTC
Atlas of Cancer Signalling NetworkCUTC
Wikipedia pathwaysCUTC
Orthology - Evolution
OrthoDB51076
GeneTree (enSembl)ENSG00000119929
Phylogenetic Trees/Animal Genes : TreeFamCUTC
Homologs : HomoloGeneCUTC
Homology/Alignments : Family Browser (UCSC)CUTC
Gene fusions - Rearrangements
Fusion : QuiverCUTC
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCUTC [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CUTC
dbVarCUTC
ClinVarCUTC
MonarchCUTC
1000_GenomesCUTC 
Exome Variant ServerCUTC
GNOMAD BrowserENSG00000119929
Varsome BrowserCUTC
ACMGCUTC variants
VarityQ9NTM9
Genomic Variants (DGV)CUTC [DGVbeta]
DECIPHERCUTC [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCUTC 
Mutations
ICGC Data PortalCUTC 
TCGA Data PortalCUTC 
Broad Tumor PortalCUTC
OASIS PortalCUTC [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCUTC  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCUTC
Mutations and Diseases : HGMDCUTC
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCUTC
DgiDB (Drug Gene Interaction Database)CUTC
DoCM (Curated mutations)CUTC
CIViC (Clinical Interpretations of Variants in Cancer)CUTC
Cancer3DCUTC
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610101   
Orphanet
DisGeNETCUTC
MedgenCUTC
Genetic Testing Registry CUTC
NextProtQ9NTM9 [Medical]
GENETestsCUTC
Target ValidationCUTC
Huge Navigator CUTC [HugePedia]
ClinGenCUTC
Clinical trials, drugs, therapy
MyCancerGenomeCUTC
Protein Interactions : CTDCUTC
Pharm GKB GenePA134901980
PharosQ9NTM9
Clinical trialCUTC
Miscellaneous
canSAR (ICR)CUTC
HarmonizomeCUTC
DataMed IndexCUTC
Probes
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCUTC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:47:08 CEST 2021

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