Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CUZD1 (CUB and zona pellucida like domains 1)

Identity

Alias (NCBI)ERG-1
ERG1
ITMAP1
UO-44
HGNC (Hugo) CUZD1
HGNC Alias symbERG-1
UO-44
HGNC Previous nameCUB and zona pellucida-like domains 1
LocusID (NCBI) 50624
Atlas_Id 46600
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 122832158 and ends at 122845857 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CUZD1 (10q26.13) / PACS1 (11q13.1)TIAL1 (10q26.11) / CUZD1 (10q26.13)TIAL1 10q26.11 / CUZD1 10q26.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CUZD1   17937
Cards
Entrez_Gene (NCBI)CUZD1    CUB and zona pellucida like domains 1
AliasesERG-1; ERG1; ITMAP1; UO-44
GeneCards (Weizmann)CUZD1
Ensembl hg19 (Hinxton)ENSG00000138161 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000138161 [Gene_View]  ENSG00000138161 [Sequence]  chr10:122832158-122845857 [Contig_View]  CUZD1 [Vega]
ICGC DataPortalENSG00000138161
TCGA cBioPortalCUZD1
AceView (NCBI)CUZD1
Genatlas (Paris)CUZD1
SOURCE (Princeton)CUZD1
Genetics Home Reference (NIH)CUZD1
Genomic and cartography
GoldenPath hg38 (UCSC)CUZD1  -     chr10:122832158-122845857 -  10q26.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CUZD1  -     10q26.13   [Description]    (hg19-Feb_2009)
GoldenPathCUZD1 - 10q26.13 [CytoView hg19]  CUZD1 - 10q26.13 [CytoView hg38]
ImmunoBaseENSG00000138161
Genome Data Viewer NCBICUZD1 [Mapview hg19]  
OMIM616644   
Gene and transcription
Genbank (Entrez)AF305835 AK289445 AY260047 AY260048 AY260049
RefSeq transcript (Entrez)NM_022034
Consensus coding sequences : CCDS (NCBI)CUZD1
Gene ExpressionCUZD1 [ NCBI-GEO ]   CUZD1 [ EBI - ARRAY_EXPRESS ]   CUZD1 [ SEEK ]   CUZD1 [ MEM ]
Gene Expression Viewer (FireBrowse)CUZD1 [ Firebrowse - Broad ]
GenevisibleExpression of CUZD1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)50624
GTEX Portal (Tissue expression)CUZD1
Human Protein AtlasENSG00000138161-CUZD1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86UP6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86UP6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86UP6
PhosPhoSitePlusQ86UP6
Domaine pattern : Prosite (Expaxy)CUB (PS01180)    ZP_2 (PS51034)   
Domains : Interpro (EBI)CUB_dom    Sperma_CUB_dom_sf    ZP_dom   
Domain families : Pfam (Sanger)CUB (PF00431)    Zona_pellucida (PF00100)   
Domain families : Pfam (NCBI)pfam00431    pfam00100   
Domain families : Smart (EMBL)CUB (SM00042)  ZP (SM00241)  
Conserved Domain (NCBI)CUZD1
SuperfamilyQ86UP6
AlphaFold pdb e-kbQ86UP6   
Human Protein Atlas [tissue]ENSG00000138161-CUZD1 [tissue]
HPRD06476
Protein Interaction databases
DIP (DOE-UCLA)Q86UP6
IntAct (EBI)Q86UP6
BioGRIDCUZD1
STRING (EMBL)CUZD1
ZODIACCUZD1
Ontologies - Pathways
QuickGOQ86UP6
Ontology : AmiGOcell cycle  cell adhesion  membrane  integral component of membrane  transport vesicle membrane  trypsinogen activation  zymogen granule membrane  cell division  
Ontology : EGO-EBIcell cycle  cell adhesion  membrane  integral component of membrane  transport vesicle membrane  trypsinogen activation  zymogen granule membrane  cell division  
Pathways : BIOCARTACadmium induces DNA synthesis and proliferation in macrophages [Genes]   
NDEx NetworkCUZD1
Atlas of Cancer Signalling NetworkCUZD1
Wikipedia pathwaysCUZD1
Orthology - Evolution
OrthoDB50624
GeneTree (enSembl)ENSG00000138161
Phylogenetic Trees/Animal Genes : TreeFamCUZD1
Homologs : HomoloGeneCUZD1
Homology/Alignments : Family Browser (UCSC)CUZD1
Gene fusions - Rearrangements
Fusion : MitelmanTIAL1/CUZD1 [10q26.11/10q26.13]  
Fusion : QuiverCUZD1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCUZD1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CUZD1
dbVarCUZD1
ClinVarCUZD1
MonarchCUZD1
1000_GenomesCUZD1 
Exome Variant ServerCUZD1
GNOMAD BrowserENSG00000138161
Varsome BrowserCUZD1
ACMGCUZD1 variants
VarityQ86UP6
Genomic Variants (DGV)CUZD1 [DGVbeta]
DECIPHERCUZD1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCUZD1 
Mutations
ICGC Data PortalCUZD1 
TCGA Data PortalCUZD1 
Broad Tumor PortalCUZD1
OASIS PortalCUZD1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCUZD1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCUZD1
Mutations and Diseases : HGMDCUZD1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCUZD1
DgiDB (Drug Gene Interaction Database)CUZD1
DoCM (Curated mutations)CUZD1
CIViC (Clinical Interpretations of Variants in Cancer)CUZD1
Cancer3DCUZD1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616644   
Orphanet
DisGeNETCUZD1
MedgenCUZD1
Genetic Testing Registry CUZD1
NextProtQ86UP6 [Medical]
GENETestsCUZD1
Target ValidationCUZD1
Huge Navigator CUZD1 [HugePedia]
ClinGenCUZD1
Clinical trials, drugs, therapy
MyCancerGenomeCUZD1
Protein Interactions : CTDCUZD1
Pharm GKB GenePA134903546
PharosQ86UP6
Clinical trialCUZD1
Miscellaneous
canSAR (ICR)CUZD1
HarmonizomeCUZD1
DataMed IndexCUZD1
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCUZD1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:05:44 CEST 2021

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