CX3CR1 (chemokine (C-X3-C motif) receptor 1)

Identity

Other names	CCRL1
	CMKBRL1
	CMKDR1
	GPR13
	GPRV28
	V28
HGNC	CX3CR1
Location	3p21.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CX3CR1   2558
Entrez_Gene	CX3CR1  1524  chemokine (C-X3-C motif) receptor 1
	Cards
GeneCards	CX3CR1
Ensembl	CX3CR1 [Search_View]   ENSG00000168329 [Gene_View]
Genatlas	CX3CR1
GeneLynx	CX3CR1
eGenome	CX3CR1
euGene	1524
	Genomic and cartography
GoldenPath	CX3CR1  -  3p21.3   chr3:39279989-39296531 -  3p22.2   [Description]    (hg18-March_2006)
Ensembl	CX3CR1 - 3p22.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CX3CR1
	Gene and transcription
Genbank	AK225764 [ ENTREZ ]
Genbank	BC017855 [ ENTREZ ]
Genbank	BC028078 [ ENTREZ ]
Genbank	BG541473 [ ENTREZ ]
Genbank	DQ891063 [ ENTREZ ]
RefSeq	NM_001337 [ SRS ]    NM_001337 [ ENTREZ ]
RefSeq	AC_000046 [ SRS ]    AC_000046 [ ENTREZ ]
RefSeq	AC_000135 [ SRS ]    AC_000135 [ ENTREZ ]
RefSeq	NC_000003 [ SRS ]    NC_000003 [ ENTREZ ]
RefSeq	NT_022517 [ SRS ]    NT_022517 [ ENTREZ ]
RefSeq	NW_001838877 [ SRS ]    NW_001838877 [ ENTREZ ]
RefSeq	NW_921651 [ SRS ]    NW_921651 [ ENTREZ ]
AceView	CX3CR1 AceView - NCBI
Unigene	Hs.78913 [ SRS ]    Hs.78913 [ NCBI ]     HS78913 [ spliceNest ]
Fast-db	4482 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P49238 [ SRS]    P49238 [ EXPASY ]     P49238 [ INTERPRO ]     P49238 [ UNIPROT ]
Prosite	PS00237 G_PROTEIN_RECEP_F1_1 [ SRS ]    PS00237 G_PROTEIN_RECEP_F1_1 [ Expasy ]
Prosite	PS50262 G_PROTEIN_RECEP_F1_2 [ SRS ]    PS50262 G_PROTEIN_RECEP_F1_2 [ Expasy ]
Interpro	IPR005387 CX3C_fract_rcpt [ SRS ]    IPR005387 CX3C_fract_rcpt [ EBI ]
Interpro	IPR001277 CXC_4_rcpt [ SRS ]    IPR001277 CXC_4_rcpt [ EBI ]
Interpro	IPR000276 GPCR_Rhodpsn [ SRS ]    IPR000276 GPCR_Rhodpsn [ EBI ]
Interpro	IPR017452 GPCR_Rhodpsn_supfam [ SRS ]    IPR017452 GPCR_Rhodpsn_supfam [ EBI ]
CluSTr	P49238
Pfam	PF00001 7tm_1 [ SRS ]    PF00001 7tm_1 [ Sanger ]    pfam00001 [ NCBI-CDD ]
Blocks	P49238
HPRD	03277
	Protein Interaction databases
DIP	P49238
IntAct	P49238
	Polymorphism : SNP, mutations, diseases
OMIM	601470;602075;607339    [ map ]
GENECLINICS	601470;602075;607339
SNP	CX3CR1 [dbSNP-NCBI]
SNP	NM_001337 [SNP-NCI]
SNP	CX3CR1 [GeneSNPs - Utah]  CX3CR1] [HGBASE - SRS]
HAPMAP	CX3CR1 [HAPMAP]
COSMIC	CX3CR1 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	CX3CR1
	General knowledge
Family Browser	CX3CR1 [UCSC Family Browser]
SOURCE	NM_001337
SMD	Hs.78913
SAGE	Hs.78913
GO	rhodopsin-like receptor activity [Amigo]  rhodopsin-like receptor activity
GO	receptor activity [Amigo]  receptor activity
GO	protein binding [Amigo]  protein binding
GO	plasma membrane [Amigo]  plasma membrane
GO	integral to plasma membrane [Amigo]  integral to plasma membrane
GO	chemotaxis [Amigo]  chemotaxis
GO	cellular defense response [Amigo]  cellular defense response
GO	cell adhesion [Amigo]  cell adhesion
GO	signal transduction [Amigo]  signal transduction
GO	G-protein coupled receptor protein signaling pathway [Amigo]  G-protein coupled receptor protein signaling pathway
GO	response to wounding [Amigo]  response to wounding
GO	C-X-C chemokine receptor activity [Amigo]  C-X-C chemokine receptor activity
KEGG	Cytokine-cytokine receptor interaction
PubGene	CX3CR1
TreeFam	CX3CR1
CTD	1524 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CX3CR1 Related clones (RZPD - Berlin)
	PubMed
PubMed	101 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:06:43 2008