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CXXC4-AS1 (CXXC4 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) CXXC4-AS1
LocusID (NCBI) 101929468
Atlas_Id 79140
Location 4q24  [Link to chromosome band 4q24]
Location_base_pair Starts at 104490965 and ends at 104697592 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CXXC4-AS1   41054
Cards
Entrez_Gene (NCBI)CXXC4-AS1  101929468  CXXC4 antisense RNA 1
Aliases
GeneCards (Weizmann)CXXC4-AS1
Ensembl hg19 (Hinxton)ENSG00000245384 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245384 [Gene_View]  chr4:104490965-104697592 [Contig_View]  CXXC4-AS1 [Vega]
ICGC DataPortalENSG00000245384
TCGA cBioPortalCXXC4-AS1
AceView (NCBI)CXXC4-AS1
Genatlas (Paris)CXXC4-AS1
WikiGenes101929468
SOURCE (Princeton)CXXC4-AS1
Genetics Home Reference (NIH)CXXC4-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CXXC4-AS1  -     chr4:104490965-104697592 +  4q24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CXXC4-AS1  -     4q24   [Description]    (hg19-Feb_2009)
EnsemblCXXC4-AS1 - 4q24 [CytoView hg19]  CXXC4-AS1 - 4q24 [CytoView hg38]
Mapping of homologs : NCBICXXC4-AS1 [Mapview hg19]  CXXC4-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094561
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CXXC4-AS1
Cluster EST : UnigeneHs.480435 [ NCBI ]
CGAP (NCI)Hs.480435
Alternative Splicing GalleryENSG00000245384
Gene ExpressionCXXC4-AS1 [ NCBI-GEO ]   CXXC4-AS1 [ EBI - ARRAY_EXPRESS ]   CXXC4-AS1 [ SEEK ]   CXXC4-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CXXC4-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929468
GTEX Portal (Tissue expression)CXXC4-AS1
Human Protein AtlasENSG00000245384-CXXC4-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CXXC4-AS1
DMDM Disease mutations101929468
Blocks (Seattle)CXXC4-AS1
Human Protein Atlas [tissue]ENSG00000245384-CXXC4-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000245384
BioGRIDCXXC4-AS1
STRING (EMBL)CXXC4-AS1
ZODIACCXXC4-AS1
Ontologies - Pathways
Huge Navigator CXXC4-AS1 [HugePedia]
snp3D : Map Gene to Disease101929468
BioCentury BCIQCXXC4-AS1
ClinGenCXXC4-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929468
Clinical trialCXXC4-AS1
Miscellaneous
canSAR (ICR)CXXC4-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCXXC4-AS1
EVEXCXXC4-AS1
GoPubMedCXXC4-AS1
iHOPCXXC4-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Feb 23 18:15:43 CET 2018

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