Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CXorf36 (chromosome X open reading frame 36)

Identity

Alias_symbol (synonym)FLJ14103
DIA1R
Other alias4930578C19Rik
EPQL1862
PRO3743
bA435K1.1
HGNC (Hugo) CXorf36
LocusID (NCBI) 79742
Atlas_Id 62218
Location Xp11.3  [Link to chromosome band Xp11]
Location_base_pair Starts at 45162311 and ends at 45200901 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CXCR5 (11q23.3) / CXorf36 (Xp11.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CXorf36   25866
Cards
Entrez_Gene (NCBI)CXorf36  79742  chromosome X open reading frame 36
Aliases4930578C19Rik; DIA1R; EPQL1862; PRO3743; 
bA435K1.1
GeneCards (Weizmann)CXorf36
Ensembl hg19 (Hinxton)ENSG00000147113 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000147113 [Gene_View]  chrX:45162311-45200901 [Contig_View]  CXorf36 [Vega]
ICGC DataPortalENSG00000147113
TCGA cBioPortalCXorf36
AceView (NCBI)CXorf36
Genatlas (Paris)CXorf36
WikiGenes79742
SOURCE (Princeton)CXorf36
Genetics Home Reference (NIH)CXorf36
Genomic and cartography
GoldenPath hg38 (UCSC)CXorf36  -     chrX:45162311-45200901 -  Xp11.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CXorf36  -     Xp11.3   [Description]    (hg19-Feb_2009)
EnsemblCXorf36 - Xp11.3 [CytoView hg19]  CXorf36 - Xp11.3 [CytoView hg38]
Mapping of homologs : NCBICXorf36 [Mapview hg19]  CXorf36 [Mapview hg38]
OMIM300959   
Gene and transcription
Genbank (Entrez)AF289581 AK024165 AK055190 AK056730 AK094014
RefSeq transcript (Entrez)NM_024689 NM_176819
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CXorf36
Cluster EST : UnigeneHs.98321 [ NCBI ]
CGAP (NCI)Hs.98321
Alternative Splicing GalleryENSG00000147113
Gene ExpressionCXorf36 [ NCBI-GEO ]   CXorf36 [ EBI - ARRAY_EXPRESS ]   CXorf36 [ SEEK ]   CXorf36 [ MEM ]
Gene Expression Viewer (FireBrowse)CXorf36 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79742
GTEX Portal (Tissue expression)CXorf36
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H7Y0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H7Y0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H7Y0
Splice isoforms : SwissVarQ9H7Y0
PhosPhoSitePlusQ9H7Y0
Domains : Interpro (EBI)FAM69_kinase_dom    UPF0672   
Domain families : Pfam (Sanger)PIP49_C (PF12260)   
Domain families : Pfam (NCBI)pfam12260   
Domain structure : Prodom (Prabi Lyon)UPF0672 (PD307452)   
Conserved Domain (NCBI)CXorf36
DMDM Disease mutations79742
Blocks (Seattle)CXorf36
SuperfamilyQ9H7Y0
Human Protein AtlasENSG00000147113
Peptide AtlasQ9H7Y0
HPRD06524
IPIIPI00642861   IPI00002978   IPI00103775   
Protein Interaction databases
DIP (DOE-UCLA)Q9H7Y0
IntAct (EBI)Q9H7Y0
FunCoupENSG00000147113
BioGRIDCXorf36
STRING (EMBL)CXorf36
ZODIACCXorf36
Ontologies - Pathways
QuickGOQ9H7Y0
Ontology : AmiGOextracellular region  regulation of signal transduction  
Ontology : EGO-EBIextracellular region  regulation of signal transduction  
NDEx NetworkCXorf36
Atlas of Cancer Signalling NetworkCXorf36
Wikipedia pathwaysCXorf36
Orthology - Evolution
OrthoDB79742
GeneTree (enSembl)ENSG00000147113
Phylogenetic Trees/Animal Genes : TreeFamCXorf36
HOVERGENQ9H7Y0
HOGENOMQ9H7Y0
Homologs : HomoloGeneCXorf36
Homology/Alignments : Family Browser (UCSC)CXorf36
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCXorf36 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CXorf36
dbVarCXorf36
ClinVarCXorf36
1000_GenomesCXorf36 
Exome Variant ServerCXorf36
ExAC (Exome Aggregation Consortium)CXorf36 (select the gene name)
Genetic variants : HAPMAP79742
Genomic Variants (DGV)CXorf36 [DGVbeta]
DECIPHERCXorf36 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCXorf36 
Mutations
ICGC Data PortalCXorf36 
TCGA Data PortalCXorf36 
Broad Tumor PortalCXorf36
OASIS PortalCXorf36 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCXorf36  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCXorf36
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch CXorf36
DgiDB (Drug Gene Interaction Database)CXorf36
DoCM (Curated mutations)CXorf36 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CXorf36 (select a term)
intoGenCXorf36
Cancer3DCXorf36(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM300959   
Orphanet
MedgenCXorf36
Genetic Testing Registry CXorf36
NextProtQ9H7Y0 [Medical]
TSGene79742
GENETestsCXorf36
Target ValidationCXorf36
Huge Navigator CXorf36 [HugePedia]
snp3D : Map Gene to Disease79742
BioCentury BCIQCXorf36
ClinGenCXorf36
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79742
Chemical/Pharm GKB GenePA134972038
Clinical trialCXorf36
Miscellaneous
canSAR (ICR)CXorf36 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCXorf36
EVEXCXorf36
GoPubMedCXorf36
iHOPCXorf36
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:39 CEST 2017

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