Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CXorf65 (chromosome X open reading frame 65)

Identity

Other alias-
HGNC (Hugo) CXorf65
LocusID (NCBI) 158830
Atlas_Id 62228
Location Xq13.1  [Link to chromosome band Xq13]
Location_base_pair Starts at 71103889 and ends at 71106788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
IL2RG (Xq13.1) / CXorf65 (Xq13.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CXorf65   33713
Cards
Entrez_Gene (NCBI)CXorf65  158830  chromosome X open reading frame 65
Aliases
GeneCards (Weizmann)CXorf65
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:71103889-71106788 [Contig_View]  CXorf65 [Vega]
TCGA cBioPortalCXorf65
AceView (NCBI)CXorf65
Genatlas (Paris)CXorf65
WikiGenes158830
SOURCE (Princeton)CXorf65
Genetics Home Reference (NIH)CXorf65
Genomic and cartography
GoldenPath hg38 (UCSC)CXorf65  -     chrX:71103889-71106788 -  Xq13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CXorf65  -     Xq13.1   [Description]    (hg19-Feb_2009)
EnsemblCXorf65 - Xq13.1 [CytoView hg19]  CXorf65 - Xq13.1 [CytoView hg38]
Mapping of homologs : NCBICXorf65 [Mapview hg19]  CXorf65 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA889552 BC144434 DB457782 DB523273 W95038
RefSeq transcript (Entrez)NM_001025265
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CXorf65
Cluster EST : UnigeneHs.443936 [ NCBI ]
CGAP (NCI)Hs.443936
Gene ExpressionCXorf65 [ NCBI-GEO ]   CXorf65 [ EBI - ARRAY_EXPRESS ]   CXorf65 [ SEEK ]   CXorf65 [ MEM ]
Gene Expression Viewer (FireBrowse)CXorf65 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)158830
GTEX Portal (Tissue expression)CXorf65
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NEN9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NEN9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NEN9
Splice isoforms : SwissVarA6NEN9
PhosPhoSitePlusA6NEN9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CXorf65
DMDM Disease mutations158830
Blocks (Seattle)CXorf65
SuperfamilyA6NEN9
Peptide AtlasA6NEN9
HPRD18741
IPIIPI00088847   IPI00642215   
Protein Interaction databases
DIP (DOE-UCLA)A6NEN9
IntAct (EBI)A6NEN9
BioGRIDCXorf65
STRING (EMBL)CXorf65
ZODIACCXorf65
Ontologies - Pathways
QuickGOA6NEN9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCXorf65
Atlas of Cancer Signalling NetworkCXorf65
Wikipedia pathwaysCXorf65
Orthology - Evolution
OrthoDB158830
Phylogenetic Trees/Animal Genes : TreeFamCXorf65
HOVERGENA6NEN9
HOGENOMA6NEN9
Homologs : HomoloGeneCXorf65
Homology/Alignments : Family Browser (UCSC)CXorf65
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCXorf65 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CXorf65
dbVarCXorf65
ClinVarCXorf65
1000_GenomesCXorf65 
Exome Variant ServerCXorf65
ExAC (Exome Aggregation Consortium)CXorf65 (select the gene name)
Genetic variants : HAPMAP158830
Genomic Variants (DGV)CXorf65 [DGVbeta]
DECIPHERCXorf65 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCXorf65 
Mutations
ICGC Data PortalCXorf65 
TCGA Data PortalCXorf65 
Broad Tumor PortalCXorf65
OASIS PortalCXorf65 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCXorf65  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCXorf65
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch CXorf65
DgiDB (Drug Gene Interaction Database)CXorf65
DoCM (Curated mutations)CXorf65 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CXorf65 (select a term)
intoGenCXorf65
Cancer3DCXorf65(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCXorf65
Genetic Testing Registry CXorf65
NextProtA6NEN9 [Medical]
TSGene158830
GENETestsCXorf65
Target ValidationCXorf65
Huge Navigator CXorf65 [HugePedia]
snp3D : Map Gene to Disease158830
BioCentury BCIQCXorf65
ClinGenCXorf65
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD158830
Chemical/Pharm GKB GenePA164718500
Clinical trialCXorf65
Miscellaneous
canSAR (ICR)CXorf65 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCXorf65
EVEXCXorf65
GoPubMedCXorf65
iHOPCXorf65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:41 CEST 2017

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