Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CXorf67 (chromosome X open reading frame 67)

Identity

Other alias-
HGNC (Hugo) CXorf67
LocusID (NCBI) 340602
Atlas_Id 53814
Location Xp11.22  [Link to chromosome band Xp11]
Location_base_pair Starts at 51406915 and ends at 51408837 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MBTD1 (17q21.33) / CXorf67 (Xp11.22)MBTD1 17q21.33 / CXorf67 Xp11.22

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  Uterus: Low-grade endometrial stromal sarcoma with t(X;17)(p11.2;q21.33) MBTD1/CXorf6


External links

Nomenclature
HGNC (Hugo)CXorf67   33738
Cards
Entrez_Gene (NCBI)CXorf67  340602  chromosome X open reading frame 67
Aliases
GeneCards (Weizmann)CXorf67
Ensembl hg19 (Hinxton)ENSG00000187690 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000187690 [Gene_View]  chrX:51406915-51408837 [Contig_View]  CXorf67 [Vega]
ICGC DataPortalENSG00000187690
TCGA cBioPortalCXorf67
AceView (NCBI)CXorf67
Genatlas (Paris)CXorf67
WikiGenes340602
SOURCE (Princeton)CXorf67
Genetics Home Reference (NIH)CXorf67
Genomic and cartography
GoldenPath hg38 (UCSC)CXorf67  -     chrX:51406915-51408837 +  Xp11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CXorf67  -     Xp11.22   [Description]    (hg19-Feb_2009)
EnsemblCXorf67 - Xp11.22 [CytoView hg19]  CXorf67 - Xp11.22 [CytoView hg38]
Mapping of homologs : NCBICXorf67 [Mapview hg19]  CXorf67 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC046248
RefSeq transcript (Entrez)NM_203407
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CXorf67
Cluster EST : UnigeneHs.97053 [ NCBI ]
CGAP (NCI)Hs.97053
Alternative Splicing GalleryENSG00000187690
Gene ExpressionCXorf67 [ NCBI-GEO ]   CXorf67 [ EBI - ARRAY_EXPRESS ]   CXorf67 [ SEEK ]   CXorf67 [ MEM ]
Gene Expression Viewer (FireBrowse)CXorf67 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340602
GTEX Portal (Tissue expression)CXorf67
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ86X51   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ86X51  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ86X51
Splice isoforms : SwissVarQ86X51
PhosPhoSitePlusQ86X51
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CXorf67
DMDM Disease mutations340602
Blocks (Seattle)CXorf67
SuperfamilyQ86X51
Human Protein AtlasENSG00000187690
Peptide AtlasQ86X51
HPRD14176
IPIIPI00257965   
Protein Interaction databases
DIP (DOE-UCLA)Q86X51
IntAct (EBI)Q86X51
FunCoupENSG00000187690
BioGRIDCXorf67
STRING (EMBL)CXorf67
ZODIACCXorf67
Ontologies - Pathways
QuickGOQ86X51
Ontology : AmiGOnucleoplasm  
Ontology : EGO-EBInucleoplasm  
NDEx NetworkCXorf67
Atlas of Cancer Signalling NetworkCXorf67
Wikipedia pathwaysCXorf67
Orthology - Evolution
OrthoDB340602
GeneTree (enSembl)ENSG00000187690
Phylogenetic Trees/Animal Genes : TreeFamCXorf67
HOVERGENQ86X51
HOGENOMQ86X51
Homologs : HomoloGeneCXorf67
Homology/Alignments : Family Browser (UCSC)CXorf67
Gene fusions - Rearrangements
Fusion : MitelmanMBTD1/CXorf67 [17q21.33/Xp11.22]  [t(X;17)(p11;q21)]  
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCXorf67 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CXorf67
dbVarCXorf67
ClinVarCXorf67
1000_GenomesCXorf67 
Exome Variant ServerCXorf67
ExAC (Exome Aggregation Consortium)CXorf67 (select the gene name)
Genetic variants : HAPMAP340602
Genomic Variants (DGV)CXorf67 [DGVbeta]
DECIPHERCXorf67 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCXorf67 
Mutations
ICGC Data PortalCXorf67 
TCGA Data PortalCXorf67 
Broad Tumor PortalCXorf67
OASIS PortalCXorf67 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCXorf67  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCXorf67
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CXorf67
DgiDB (Drug Gene Interaction Database)CXorf67
DoCM (Curated mutations)CXorf67 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CXorf67 (select a term)
intoGenCXorf67
Cancer3DCXorf67(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCXorf67
Genetic Testing Registry CXorf67
NextProtQ86X51 [Medical]
TSGene340602
GENETestsCXorf67
Target ValidationCXorf67
Huge Navigator CXorf67 [HugePedia]
snp3D : Map Gene to Disease340602
BioCentury BCIQCXorf67
ClinGenCXorf67
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340602
Chemical/Pharm GKB GenePA166049013
Clinical trialCXorf67
Miscellaneous
canSAR (ICR)CXorf67 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCXorf67
EVEXCXorf67
GoPubMedCXorf67
iHOPCXorf67
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:30:15 CEST 2017

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