Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CYB5B (cytochrome b5 type B (outer mitochondrial membrane))

Identity

Other namesCYB5-M
CYPB5M
OMB5
HGNC (Hugo) CYB5B
LocusID (NCBI) 80777
Location 16q22.1
Location_base_pair Starts at 69458498 and ends at 69500167 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)CYB5B   24374
Entrez_Gene (NCBI)CYB5B  80777  cytochrome b5 type B (outer mitochondrial membrane)
Cards
GeneCards (Weizmann)CYB5B
Ensembl (Hinxton)ENSG00000103018 [Gene_View]  chr16:69458498-69500167 [Contig_View]  CYB5B [Vega]
AceView (NCBI)CYB5B
Genatlas (Paris)CYB5B
SOURCE (Stanford)NM_030579
Genomic and cartography
GoldenPath (UCSC)CYB5B  -  16q22.1   chr16:69458498-69500167 +  16q22.1   [Description]    (hg19-Feb_2009)
EnsemblCYB5B - 16q22.1 [CytoView]
Mapping of homologs : NCBICYB5B [Mapview]
OMIM611964   
Gene and transcription
Genbank (Entrez)AB009282 AK098148 AK125218 AK291576 BC004373
RefSeq transcript (SRS)NM_030579
RefSeq transcript (Entrez)NM_030579
RefSeq genomic (SRS)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004078087
RefSeq genomic (Entrez)AC_000148 NC_000016 NC_018927 NT_010498 NW_001838290 NW_004078087
Consensus coding sequences : CCDS (NCBI)CYB5B
Cluster EST : UnigeneHs.461131 [ SRS ] Hs.461131 [ NCBI ]
CGAP (NCI)Hs.461131
Alternative Splicing : Fast-db (Paris)GSHG0011317
Alternative Splicing GalleryENSG00000103018
Gene ExpressionCYB5B [ NCBI-GEO ]   CYB5B [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO43169 (SRS) O43169 (Uniprot)
NextProtO43169
With graphics : InterProO43169
Splice isoforms : SwissVarO43169(Swissvar)
Domaine pattern : Prosite (SRS)CYTOCHROME_B5_1 (PS00191)    CYTOCHROME_B5_2 (PS50255)   
Domaine pattern : Prosite (Expaxy)CYTOCHROME_B5_1 (PS00191)    CYTOCHROME_B5_2 (PS50255)   
Domains : Interpro (SRS)Cyt_B5-like_heme/steroid-bd    Cyt_B5_heme-BS   
Domains : Interpro (EBI)Cyt_B5-like_heme/steroid-bd    Cyt_B5_heme-BS   
Related proteins : CluSTrO43169
Domain families : Pfam (SRS)Cyt-b5 (PF00173)   
Domain families : Pfam (Sanger)Cyt-b5 (PF00173)   
Domain families : Pfam (NCBI)pfam00173   
DMDM80777
Blocks (Seattle)O43169
PDB (SRS)3NER   
PDB (PDBSum)3NER   
PDB (IMB)3NER   
PDB (RSDB)3NER   
Human Protein AtlasENSG00000103018
HPRD13106
IPIIPI00303954   IPI00966243   
Protein Interaction databases
DIP (DOE-UCLA)O43169
IntAct (EBI)O43169
FunCoupENSG00000103018
REACTOMECYB5B
Protein Interaction Database80777
BioGRIDCYB5B
InParanoidO43169
Interologous Interaction database O43169
IntegromeDBCYB5B
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CYB5B
SNP (GeneSNP Utah)CYB5B
SNP : HGBaseCYB5B
Genetic variants : HAPMAPCYB5B
Somatic Mutations in Cancer : COSMICCYB5B 
CONAN: Copy Number AnalysisCYB5B 
Mutations and Diseases : HGMDCYB5B
OMIM611964   
GENETests611964   
Disease Genetic AssociationCYB5B
Huge Navigator CYB5B [HugePedia]  CYB5B [HugeCancerGEM]
Genomic VariantsCYB5B  CYB5B [DGVbeta]
ClinVarCYB5B
snp3D : Map Gene to Disease80777
General knowledge
Homologs : HomoloGeneCYB5B
Homology/Alignments : Family Browser (UCSC)CYB5B
Phylogenetic Trees/Animal Genes : TreeFamCYB5B
Chemical/Protein Interactions : CTD80777
Chemical/Pharm GKB GenePA143485445
Clinical trialCYB5B
Cancer Resource (Charite)ENSG00000103018
Ontology : AmiGOmitochondrial outer membrane  integral to membrane  heme binding  electron transport chain  metal ion binding  
Ontology : EGO-EBImitochondrial outer membrane  integral to membrane  heme binding  electron transport chain  metal ion binding  
Other databases
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
PubGeneCYB5B
iHOPCYB5B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 14 17:33:55 CEST 2013
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