Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CYB5RL (cytochrome b5 reductase-like)

Identity

Alias_namescytochrome b5 reductase-like
Alias_symbol (synonym)LOC606495
Other alias-
HGNC (Hugo) CYB5RL
LocusID (NCBI) 606495
Atlas_Id 62238
Location 1p32.3  [Link to chromosome band 1p32]
Location_base_pair Starts at 54638027 and ends at 54665746 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CYB5RL   32220
Cards
Entrez_Gene (NCBI)CYB5RL  606495  cytochrome b5 reductase-like
Aliases
GeneCards (Weizmann)CYB5RL
Ensembl hg19 (Hinxton) [Gene_View]  chr1:54638027-54665746 [Contig_View]  CYB5RL [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:54638027-54665746 [Contig_View]  CYB5RL [Vega]
TCGA cBioPortalCYB5RL
AceView (NCBI)CYB5RL
Genatlas (Paris)CYB5RL
WikiGenes606495
SOURCE (Princeton)CYB5RL
Genetics Home Reference (NIH)CYB5RL
Genomic and cartography
GoldenPath hg19 (UCSC)CYB5RL  -     chr1:54638027-54665746 -  1p32.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CYB5RL  -     1p32.3   [Description]    (hg38-Dec_2013)
EnsemblCYB5RL - 1p32.3 [CytoView hg19]  CYB5RL - 1p32.3 [CytoView hg38]
Mapping of homologs : NCBICYB5RL [Mapview hg19]  CYB5RL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090456 BC012781 BC038388 BC049198 BC064419
RefSeq transcript (Entrez)NM_001031672
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929290
Consensus coding sequences : CCDS (NCBI)CYB5RL
Cluster EST : UnigeneHs.591426 [ NCBI ]
CGAP (NCI)Hs.591426
Gene ExpressionCYB5RL [ NCBI-GEO ]   CYB5RL [ EBI - ARRAY_EXPRESS ]   CYB5RL [ SEEK ]   CYB5RL [ MEM ]
Gene Expression Viewer (FireBrowse)CYB5RL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)606495
GTEX Portal (Tissue expression)CYB5RL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IPT4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IPT4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IPT4
Splice isoforms : SwissVarQ6IPT4
PhosPhoSitePlusQ6IPT4
Domaine pattern : Prosite (Expaxy)FAD_FR (PS51384)   
Domains : Interpro (EBI)Fd_Rdtase_FAD-bd    NADH-Cyt_B5_reductase    Oxidoreductase-like_N    OxRdtase_FAD-bd_dom    OxRdtase_FAD/NAD-bd    Riboflavin_synthase-like_b-brl   
Domain families : Pfam (Sanger)FAD_binding_6 (PF00970)    NAD_binding_1 (PF00175)    Oxidored-like (PF09791)   
Domain families : Pfam (NCBI)pfam00970    pfam00175    pfam09791   
Conserved Domain (NCBI)CYB5RL
DMDM Disease mutations606495
Blocks (Seattle)CYB5RL
SuperfamilyQ6IPT4
Peptide AtlasQ6IPT4
IPIIPI00845292   IPI00893503   IPI00929472   IPI00926380   IPI00927661   IPI00977468   IPI00979687   IPI00983092   
Protein Interaction databases
DIP (DOE-UCLA)Q6IPT4
IntAct (EBI)Q6IPT4
BioGRIDCYB5RL
STRING (EMBL)CYB5RL
ZODIACCYB5RL
Ontologies - Pathways
QuickGOQ6IPT4
Ontology : AmiGOcytochrome-b5 reductase activity, acting on NAD(P)H  nucleus  nucleoplasm  oxidation-reduction process  
Ontology : EGO-EBIcytochrome-b5 reductase activity, acting on NAD(P)H  nucleus  nucleoplasm  oxidation-reduction process  
NDEx NetworkCYB5RL
Atlas of Cancer Signalling NetworkCYB5RL
Wikipedia pathwaysCYB5RL
Orthology - Evolution
OrthoDB606495
Phylogenetic Trees/Animal Genes : TreeFamCYB5RL
HOVERGENQ6IPT4
HOGENOMQ6IPT4
Homologs : HomoloGeneCYB5RL
Homology/Alignments : Family Browser (UCSC)CYB5RL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCYB5RL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYB5RL
dbVarCYB5RL
ClinVarCYB5RL
1000_GenomesCYB5RL 
Exome Variant ServerCYB5RL
ExAC (Exome Aggregation Consortium)CYB5RL (select the gene name)
Genetic variants : HAPMAP606495
Genomic Variants (DGV)CYB5RL [DGVbeta]
DECIPHER (Syndromes)1:54638027-54665746  
CONAN: Copy Number AnalysisCYB5RL 
Mutations
ICGC Data PortalCYB5RL 
TCGA Data PortalCYB5RL 
Broad Tumor PortalCYB5RL
OASIS PortalCYB5RL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCYB5RL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCYB5RL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CYB5RL
DgiDB (Drug Gene Interaction Database)CYB5RL
DoCM (Curated mutations)CYB5RL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CYB5RL (select a term)
intoGenCYB5RL
Cancer3DCYB5RL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCYB5RL
Genetic Testing Registry CYB5RL
NextProtQ6IPT4 [Medical]
TSGene606495
GENETestsCYB5RL
Huge Navigator CYB5RL [HugePedia]
snp3D : Map Gene to Disease606495
BioCentury BCIQCYB5RL
ClinGenCYB5RL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD606495
Chemical/Pharm GKB GenePA164718527
Clinical trialCYB5RL
Miscellaneous
canSAR (ICR)CYB5RL (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYB5RL
EVEXCYB5RL
GoPubMedCYB5RL
iHOPCYB5RL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:00:49 CET 2017

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