Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CYP19A1 (cytochrome P450, family 19, subfamily A, polypeptide 1)

Identity

Other namesARO
ARO1
CPV1
CYAR
CYP19
CYPXIX
P-450AROM
HGNC (Hugo) CYP19A1
LocusID (NCBI) 1588
Location 15q21.2
Location_base_pair Starts at 51500254 and ends at 51630795 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CYP19A1   2594
Entrez_Gene (NCBI)CYP19A1  1588  cytochrome P450, family 19, subfamily A, polypeptide 1
Cards
GeneCards (Weizmann)CYP19A1
Ensembl (Hinxton)ENSG00000137869 [Gene_View]  chr15:51500254-51630795 [Contig_View]  CYP19A1 [Vega]
AceView (NCBI)CYP19A1
Genatlas (Paris)CYP19A1
SOURCE (Stanford)NM_000103 NM_031226
Genomic and cartography
GoldenPath (UCSC)CYP19A1  -  15q21.2   chr15:51500254-51630795 -  15q21.2   [Description]    (hg19-Feb_2009)
EnsemblCYP19A1 - 15q21.2 [CytoView]
Mapping of homologs : NCBICYP19A1 [Mapview]
OMIM107910   139300   613546   
Gene and transcription
Genbank (Entrez)AK291778 AM392533 AM393184 BC020767 BC022896
RefSeq transcript (SRS)NM_000103 NM_031226
RefSeq transcript (Entrez)NM_000103 NM_031226
RefSeq genomic (SRS)AC_000147 NC_000015 NC_018926 NG_007982 NT_010194 NW_001838218 NW_004078084
RefSeq genomic (Entrez)AC_000147 NC_000015 NC_018926 NG_007982 NT_010194 NW_001838218 NW_004078084
Consensus coding sequences : CCDS (NCBI)CYP19A1
Cluster EST : UnigeneHs.260074 [ SRS ] Hs.260074 [ NCBI ]
CGAP (NCI)Hs.260074
Alternative Splicing : Fast-db (Paris)GSHG0010414
Alternative Splicing GalleryENSG00000137869
Gene ExpressionCYP19A1 [ NCBI-GEO ]   CYP19A1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP11511 (SRS) P11511 (Uniprot)
NextProtP11511
With graphics : InterProP11511
Splice isoforms : SwissVarP11511(Swissvar)
Domaine pattern : Prosite (SRS)CYTOCHROME_P450 (PS00086)   
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (SRS)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Related proteins : CluSTrP11511
Domain families : Pfam (SRS)p450 (PF00067)   
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
DMDM1588
Blocks (Seattle)P11511
PDB (SRS)1TQA    3EQM    3S79    3S7S    4GL5    4GL7   
PDB (PDBSum)1TQA    3EQM    3S79    3S7S    4GL5    4GL7   
PDB (IMB)1TQA    3EQM    3S79    3S7S    4GL5    4GL7   
PDB (RSDB)1TQA    3EQM    3S79    3S7S    4GL5    4GL7   
Human Protein AtlasENSG00000137869
HPRD00488
IPIIPI00465065   IPI00879236   IPI00792386   IPI00878829   IPI00878332   
Protein Interaction databases
DIP (DOE-UCLA)P11511
IntAct (EBI)P11511
FunCoupENSG00000137869
REACTOMECYP19A1
Protein Interaction Database1588
BioGRIDCYP19A1
InParanoidP11511
Interologous Interaction database P11511
IntegromeDBCYP19A1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CYP19A1
SNP (GeneSNP Utah)CYP19A1
SNP : HGBaseCYP19A1
Genetic variants : HAPMAPCYP19A1
Somatic Mutations in Cancer : COSMICCYP19A1 
CONAN: Copy Number AnalysisCYP19A1 
Mutations and Diseases : HGMDCYP19A1
OMIM107910    139300    613546   
GENETests107910    139300    613546   
Disease Genetic AssociationCYP19A1
Huge Navigator CYP19A1 [HugePedia]  CYP19A1 [HugeCancerGEM]
Genomic VariantsCYP19A1  CYP19A1 [DGVbeta]
snp3D : Map Gene to Disease1588
General knowledge
Homologs : HomoloGeneCYP19A1
Homology/Alignments : Family Browser (UCSC)CYP19A1
Phylogenetic Trees/Animal Genes : TreeFamCYP19A1
Catalytic activity : Enzyme1.14.14.1 [ Enzyme-Expasy ]   1.14.14.1 [ Enzyme-SRS ]   1.14.14.1 [ IntEnz-EBI ]   1.14.14.1 [ BRENDA ]   1.14.14.1 [ KEGG ]   
Chemical/Protein Interactions : CTD1588
Chemical/Pharm GKB GenePA27091
Clinical trialCYP19A1
Cancer Resource (Charite)ENSG00000137869
Ontology : AmiGOiron ion binding  endoplasmic reticulum  endoplasmic reticulum membrane  cytosol  steroid biosynthetic process  estrogen biosynthetic process  xenobiotic metabolic process  synaptic vesicle  steroid metabolic process  bile acid metabolic process  androgen metabolic process  male gonad development  electron carrier activity  response to herbicide  response to cesium ion  response to ionizing radiation  membrane  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen  biphenyl metabolic process  dibenzo-p-dioxin metabolic process  phthalate metabolic process  oxygen binding  heme binding  hippocampus development  hypothalamus development  melatonin metabolic process  adrenal gland development  granulocyte differentiation  response to estradiol stimulus  response to testosterone stimulus  progesterone metabolic process  response to drug  neuronal cell body  terminal button  dendritic spine  response to morphine  small molecule metabolic process  cellular response to fibroblast growth factor stimulus  regulation of synapse structure and activity  bone development  prostate gland growth  aromatase activity  cellular response to glucose stimulus  cellular response to follicle-stimulating hormone stimulus  cellular response to hydrostatic pressure  
Ontology : EGO-EBIiron ion binding  endoplasmic reticulum  endoplasmic reticulum membrane  cytosol  steroid biosynthetic process  estrogen biosynthetic process  xenobiotic metabolic process  synaptic vesicle  steroid metabolic process  bile acid metabolic process  androgen metabolic process  male gonad development  electron carrier activity  response to herbicide  response to cesium ion  response to ionizing radiation  membrane  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen  biphenyl metabolic process  dibenzo-p-dioxin metabolic process  phthalate metabolic process  oxygen binding  heme binding  hippocampus development  hypothalamus development  melatonin metabolic process  adrenal gland development  granulocyte differentiation  response to estradiol stimulus  response to testosterone stimulus  progesterone metabolic process  response to drug  neuronal cell body  terminal button  dendritic spine  response to morphine  small molecule metabolic process  cellular response to fibroblast growth factor stimulus  regulation of synapse structure and activity  bone development  prostate gland growth  aromatase activity  cellular response to glucose stimulus  cellular response to follicle-stimulating hormone stimulus  cellular response to hydrostatic pressure  
Other databases
Probes
Litterature
PubMed499 Pubmed reference(s) in Entrez
PubGeneCYP19A1
iHOPCYP19A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:26:47 CEST 2013

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