Atlas of Genetics and Cytogenetics in Oncology and Haematology

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CYP2D7P1 (cytochrome P450, family 2, subfamily D, polypeptide 7 pseudogene 1)

Identity

Other namesCYP2D
CYP2D7
CYP2D7AP
CYP2D@
P450C2D
P450DB1
HGNC (Hugo) CYP2D7P1
LocusID (NCBI) 1564
Location 22q13.2
Location_base_pair Starts at 42536214 and ends at 42540575 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CYP2D7P1   2624
Entrez_Gene (NCBI)CYP2D7P1  1564  cytochrome P450, family 2, subfamily D, polypeptide 7 pseudogene 1
Cards
GeneCards (Weizmann)CYP2D7P1
Ensembl (Hinxton) [Gene_View]  chr22:42536214-42540575 [Contig_View]  CYP2D7P1 [Vega]
AceView (NCBI)CYP2D7P1
Genatlas (Paris)CYP2D7P1
SOURCE (Stanford)
Genomic and cartography
GoldenPath (UCSC)CYP2D7P1  -  22q13.2   chr22:42536214-42540575 -  22q13.2   [Description]    (hg19-Feb_2009)
EnsemblCYP2D7P1 - 22q13.2 [CytoView]
Mapping of homologs : NCBICYP2D7P1 [Mapview]
Gene and transcription
Genbank (Entrez)AK308043 AY220845 BC108679
RefSeq transcript (SRS)
RefSeq transcript (Entrez)
RefSeq genomic (SRS)AC_000154 NC_000022 NC_018933 NG_002362 NT_011520 NW_001838745 NW_003315971 NW_004078112
RefSeq genomic (Entrez)AC_000154 NC_000022 NC_018933 NG_002362 NT_011520 NW_001838745 NW_003315971 NW_004078112
Consensus coding sequences : CCDS (NCBI)CYP2D7P1
Cluster EST : UnigeneHs.333497 [ SRS ] Hs.333497 [ NCBI ]
CGAP (NCI)Hs.333497
Alternative Splicing : Fast-db (Paris)GSHG0020441
Gene ExpressionCYP2D7P1 [ NCBI-GEO ]   CYP2D7P1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
Domain families : Pfam (SRS)
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM1564
HPRD13108
IPIIPI00970861   IPI01012300   IPI00969560   IPI01009344   IPI01010620   
Protein Interaction databases
REACTOMECYP2D7P1
Protein Interaction Database1564
BioGRIDCYP2D7P1
IntegromeDBCYP2D7P1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CYP2D7P1
SNP (GeneSNP Utah)CYP2D7P1
SNP : HGBaseCYP2D7P1
Genetic variants : HAPMAPCYP2D7P1
Somatic Mutations in Cancer : COSMICCYP2D7P1 
CONAN: Copy Number AnalysisCYP2D7P1 
Mutations and Diseases : HGMDCYP2D7P1
OMIM
GENETests
Disease Genetic AssociationCYP2D7P1
Huge Navigator CYP2D7P1 [HugePedia]  CYP2D7P1 [HugeCancerGEM]
Genomic VariantsCYP2D7P1  CYP2D7P1 [DGVbeta]
snp3D : Map Gene to Disease1564
General knowledge
Homologs : HomoloGeneCYP2D7P1
Homology/Alignments : Family Browser (UCSC)CYP2D7P1
Phylogenetic Trees/Animal Genes : TreeFamCYP2D7P1
Chemical/Protein Interactions : CTD1564
Chemical/Pharm GKB GenePA134926902
Clinical trialCYP2D7P1
Ontology : AmiGO
Ontology : EGO-EBI
Other databases
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
PubGeneCYP2D7P1
iHOPCYP2D7P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:46:37 CEST 2013
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