Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CYP2G1P (cytochrome P450 family 2 subfamily G member 1, pseudogene)

Identity

Alias_namesCYP2G1
cytochrome P450, family 2, subfamily G, polypeptide 1 pseudogene
Alias_symbol (synonym)CYP2GP1
Other aliasCYP2G2P
HGNC (Hugo) CYP2G1P
LocusID (NCBI) 22952
Atlas_Id 62254
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 40890826 and ends at 40900508 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CYP2G1P   2633
Cards
Entrez_Gene (NCBI)CYP2G1P  22952  cytochrome P450 family 2 subfamily G member 1, pseudogene
AliasesCYP2G1; CYP2G2P; CYP2GP1
GeneCards (Weizmann)CYP2G1P
Ensembl hg19 (Hinxton)ENSG00000130612 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000130612 [Gene_View]  chr19:40890826-40900508 [Contig_View]  CYP2G1P [Vega]
ICGC DataPortalENSG00000130612
TCGA cBioPortalCYP2G1P
AceView (NCBI)CYP2G1P
Genatlas (Paris)CYP2G1P
WikiGenes22952
SOURCE (Princeton)CYP2G1P
Genetics Home Reference (NIH)CYP2G1P
Genomic and cartography
GoldenPath hg38 (UCSC)CYP2G1P  -     chr19:40890826-40900508 +  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CYP2G1P  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblCYP2G1P - 19q13.2 [CytoView hg19]  CYP2G1P - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBICYP2G1P [Mapview hg19]  CYP2G1P [Mapview hg38]
OMIM601133   
Gene and transcription
Genbank (Entrez)AK127151
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CYP2G1P
Cluster EST : UnigeneHs.738699 [ NCBI ]
CGAP (NCI)Hs.738699
Alternative Splicing GalleryENSG00000130612
Gene ExpressionCYP2G1P [ NCBI-GEO ]   CYP2G1P [ EBI - ARRAY_EXPRESS ]   CYP2G1P [ SEEK ]   CYP2G1P [ MEM ]
Gene Expression Viewer (FireBrowse)CYP2G1P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22952
GTEX Portal (Tissue expression)CYP2G1P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZSU1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZSU1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZSU1
Splice isoforms : SwissVarQ6ZSU1
PhosPhoSitePlusQ6ZSU1
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
Conserved Domain (NCBI)CYP2G1P
DMDM Disease mutations22952
Blocks (Seattle)CYP2G1P
SuperfamilyQ6ZSU1
Human Protein AtlasENSG00000130612
Peptide AtlasQ6ZSU1
IPIIPI00044737   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZSU1
IntAct (EBI)Q6ZSU1
FunCoupENSG00000130612
BioGRIDCYP2G1P
STRING (EMBL)CYP2G1P
ZODIACCYP2G1P
Ontologies - Pathways
QuickGOQ6ZSU1
Ontology : AmiGOiron ion binding  arachidonic acid epoxygenase activity  epoxygenase P450 pathway  heme binding  oxidation-reduction process  
Ontology : EGO-EBIiron ion binding  arachidonic acid epoxygenase activity  epoxygenase P450 pathway  heme binding  oxidation-reduction process  
NDEx NetworkCYP2G1P
Atlas of Cancer Signalling NetworkCYP2G1P
Wikipedia pathwaysCYP2G1P
Orthology - Evolution
OrthoDB22952
GeneTree (enSembl)ENSG00000130612
Phylogenetic Trees/Animal Genes : TreeFamCYP2G1P
HOVERGENQ6ZSU1
HOGENOMQ6ZSU1
Homologs : HomoloGeneCYP2G1P
Homology/Alignments : Family Browser (UCSC)CYP2G1P
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCYP2G1P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYP2G1P
dbVarCYP2G1P
ClinVarCYP2G1P
1000_GenomesCYP2G1P 
Exome Variant ServerCYP2G1P
ExAC (Exome Aggregation Consortium)CYP2G1P (select the gene name)
Genetic variants : HAPMAP22952
Genomic Variants (DGV)CYP2G1P [DGVbeta]
DECIPHERCYP2G1P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCYP2G1P 
Mutations
ICGC Data PortalCYP2G1P 
TCGA Data PortalCYP2G1P 
Broad Tumor PortalCYP2G1P
OASIS PortalCYP2G1P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCYP2G1P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CYP2G1P
DgiDB (Drug Gene Interaction Database)CYP2G1P
DoCM (Curated mutations)CYP2G1P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CYP2G1P (select a term)
intoGenCYP2G1P
Cancer3DCYP2G1P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM601133   
Orphanet
MedgenCYP2G1P
Genetic Testing Registry CYP2G1P
NextProtQ6ZSU1 [Medical]
TSGene22952
GENETestsCYP2G1P
Target ValidationCYP2G1P
Huge Navigator CYP2G1P [HugePedia]
snp3D : Map Gene to Disease22952
BioCentury BCIQCYP2G1P
ClinGenCYP2G1P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22952
Chemical/Pharm GKB GenePA27110
Clinical trialCYP2G1P
Miscellaneous
canSAR (ICR)CYP2G1P (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYP2G1P
EVEXCYP2G1P
GoPubMedCYP2G1P
iHOPCYP2G1P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:06 CEST 2017

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