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CYP4V2 (cytochrome P450 family 4 subfamily V member 2)

Identity

Alias_namescytochrome P450, family 4, subfamily V, polypeptide 2
Alias_symbol (synonym)CYP4AH1
Other aliasBCD
HGNC (Hugo) CYP4V2
LocusID (NCBI) 285440
Atlas_Id 62267
Location 4q35.1  [Link to chromosome band 4q35]
Location_base_pair Starts at 186191520 and ends at 186213463 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CYP4V2   23198
Cards
Entrez_Gene (NCBI)CYP4V2  285440  cytochrome P450 family 4 subfamily V member 2
AliasesBCD; CYP4AH1
GeneCards (Weizmann)CYP4V2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:186191520-186213463 [Contig_View]  CYP4V2 [Vega]
TCGA cBioPortalCYP4V2
AceView (NCBI)CYP4V2
Genatlas (Paris)CYP4V2
WikiGenes285440
SOURCE (Princeton)CYP4V2
Genetics Home Reference (NIH)CYP4V2
Genomic and cartography
GoldenPath hg38 (UCSC)CYP4V2  -     chr4:186191520-186213463 +  4q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CYP4V2  -     4q35.1   [Description]    (hg19-Feb_2009)
EnsemblCYP4V2 - 4q35.1 [CytoView hg19]  CYP4V2 - 4q35.1 [CytoView hg38]
Mapping of homologs : NCBICYP4V2 [Mapview hg19]  CYP4V2 [Mapview hg38]
OMIM210370   608614   
Gene and transcription
Genbank (Entrez)AA918796 AK022114 AK122600 AK126473 AK311390
RefSeq transcript (Entrez)NM_207352
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CYP4V2
Cluster EST : UnigeneHs.587231 [ NCBI ]
CGAP (NCI)Hs.587231
Gene ExpressionCYP4V2 [ NCBI-GEO ]   CYP4V2 [ EBI - ARRAY_EXPRESS ]   CYP4V2 [ SEEK ]   CYP4V2 [ MEM ]
Gene Expression Viewer (FireBrowse)CYP4V2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)285440
GTEX Portal (Tissue expression)CYP4V2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZWL3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZWL3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZWL3
Splice isoforms : SwissVarQ6ZWL3
Catalytic activity : Enzyme1.14.13.- [ Enzyme-Expasy ]   1.14.13.-1.14.13.- [ IntEnz-EBI ]   1.14.13.- [ BRENDA ]   1.14.13.- [ KEGG ]   
PhosPhoSitePlusQ6ZWL3
Domaine pattern : Prosite (Expaxy)CYTOCHROME_P450 (PS00086)   
Domains : Interpro (EBI)Cyt_P450    Cyt_P450_CS    Cyt_P450_E_grp-I   
Domain families : Pfam (Sanger)p450 (PF00067)   
Domain families : Pfam (NCBI)pfam00067   
Conserved Domain (NCBI)CYP4V2
DMDM Disease mutations285440
Blocks (Seattle)CYP4V2
SuperfamilyQ6ZWL3
Peptide AtlasQ6ZWL3
HPRD16777
IPIIPI00619963   IPI00419217   IPI00432387   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZWL3
IntAct (EBI)Q6ZWL3
BioGRIDCYP4V2
STRING (EMBL)CYP4V2
ZODIACCYP4V2
Ontologies - Pathways
QuickGOQ6ZWL3
Ontology : AmiGOretinoid metabolic process  monooxygenase activity  iron ion binding  endoplasmic reticulum membrane  visual perception  fatty acid omega-oxidation  integral component of membrane  sterol metabolic process  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  heme binding  response to stimulus  
Ontology : EGO-EBIretinoid metabolic process  monooxygenase activity  iron ion binding  endoplasmic reticulum membrane  visual perception  fatty acid omega-oxidation  integral component of membrane  sterol metabolic process  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  heme binding  response to stimulus  
NDEx NetworkCYP4V2
Atlas of Cancer Signalling NetworkCYP4V2
Wikipedia pathwaysCYP4V2
Orthology - Evolution
OrthoDB285440
Phylogenetic Trees/Animal Genes : TreeFamCYP4V2
HOVERGENQ6ZWL3
HOGENOMQ6ZWL3
Homologs : HomoloGeneCYP4V2
Homology/Alignments : Family Browser (UCSC)CYP4V2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCYP4V2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYP4V2
dbVarCYP4V2
ClinVarCYP4V2
1000_GenomesCYP4V2 
Exome Variant ServerCYP4V2
ExAC (Exome Aggregation Consortium)CYP4V2 (select the gene name)
Genetic variants : HAPMAP285440
Genomic Variants (DGV)CYP4V2 [DGVbeta]
DECIPHERCYP4V2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCYP4V2 
Mutations
ICGC Data PortalCYP4V2 
TCGA Data PortalCYP4V2 
Broad Tumor PortalCYP4V2
OASIS PortalCYP4V2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCYP4V2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCYP4V2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Eye diseases - LOVD
BioMutasearch CYP4V2
DgiDB (Drug Gene Interaction Database)CYP4V2
DoCM (Curated mutations)CYP4V2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CYP4V2 (select a term)
intoGenCYP4V2
Cancer3DCYP4V2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM210370    608614   
Orphanet10464   
MedgenCYP4V2
Genetic Testing Registry CYP4V2
NextProtQ6ZWL3 [Medical]
TSGene285440
GENETestsCYP4V2
Target ValidationCYP4V2
Huge Navigator CYP4V2 [HugePedia]
snp3D : Map Gene to Disease285440
BioCentury BCIQCYP4V2
ClinGenCYP4V2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD285440
Chemical/Pharm GKB GenePA134912942
Clinical trialCYP4V2
Miscellaneous
canSAR (ICR)CYP4V2 (select the gene name)
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYP4V2
EVEXCYP4V2
GoPubMedCYP4V2
iHOPCYP4V2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:46 CEST 2017

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