Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CYSRT1 (cysteine-rich tail protein 1)

Identity

Alias_namesC9orf169
chromosome 9 open reading frame 169
Alias_symbol (synonym)MGC59937
Other alias
HGNC (Hugo) CYSRT1
LocusID (NCBI) 375791
Atlas_Id 62274
Location 9q34.3  [Link to chromosome band 9q34]
Location_base_pair Starts at 140119087 and ends at 140120763 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CYSRT1   30529
Cards
Entrez_Gene (NCBI)CYSRT1  375791  cysteine-rich tail protein 1
AliasesC9orf169
GeneCards (Weizmann)CYSRT1
Ensembl hg19 (Hinxton)ENSG00000197191 [Gene_View]  chr9:140119087-140120763 [Contig_View]  CYSRT1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000197191 [Gene_View]  chr9:140119087-140120763 [Contig_View]  CYSRT1 [Vega]
ICGC DataPortalENSG00000197191
TCGA cBioPortalCYSRT1
AceView (NCBI)CYSRT1
Genatlas (Paris)CYSRT1
WikiGenes375791
SOURCE (Princeton)CYSRT1
Genetics Home Reference (NIH)CYSRT1
Genomic and cartography
GoldenPath hg19 (UCSC)CYSRT1  -     chr9:140119087-140120763 +  9q34.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CYSRT1  -     9q34.3   [Description]    (hg38-Dec_2013)
EnsemblCYSRT1 - 9q34.3 [CytoView hg19]  CYSRT1 - 9q34.3 [CytoView hg38]
Mapping of homologs : NCBICYSRT1 [Mapview hg19]  CYSRT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC018787 BC052297 BE563091
RefSeq transcript (Entrez)NM_199001
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008470 NW_004929369
Consensus coding sequences : CCDS (NCBI)CYSRT1
Cluster EST : UnigeneHs.512469 [ NCBI ]
CGAP (NCI)Hs.512469
Alternative Splicing GalleryENSG00000197191
Gene ExpressionCYSRT1 [ NCBI-GEO ]   CYSRT1 [ EBI - ARRAY_EXPRESS ]   CYSRT1 [ SEEK ]   CYSRT1 [ MEM ]
Gene Expression Viewer (FireBrowse)CYSRT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)375791
GTEX Portal (Tissue expression)CYSRT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CYSRT1
DMDM Disease mutations375791
Blocks (Seattle)CYSRT1
Human Protein AtlasENSG00000197191
HPRD14696
IPIIPI00783904   
Protein Interaction databases
FunCoupENSG00000197191
BioGRIDCYSRT1
STRING (EMBL)CYSRT1
ZODIACCYSRT1
Ontologies - Pathways
Huge Navigator CYSRT1 [HugePedia]
snp3D : Map Gene to Disease375791
BioCentury BCIQCYSRT1
ClinGenCYSRT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375791
Chemical/Pharm GKB GenePA162380848
Clinical trialCYSRT1
Miscellaneous
canSAR (ICR)CYSRT1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYSRT1
EVEXCYSRT1
GoPubMedCYSRT1
iHOPCYSRT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:00:57 CET 2017

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