Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CYTB (cytochrome b)

Identity

Other aliasMTCYB
HGNC (Hugo) MT-CYB
LocusID (NCBI) 4519
Atlas_Id 50527
Location -  [Link to chromosome band ]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MT-CYB   7427
Cards
Entrez_Gene (NCBI)CYTB  4519  cytochrome b
AliasesMTCYB
GeneCards (Weizmann)CYTB
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  CYTB [Vega]
TCGA cBioPortalCYTB
AceView (NCBI)CYTB
Genatlas (Paris)CYTB
WikiGenes4519
SOURCE (Princeton)CYTB
Genetics Home Reference (NIH)CYTB
Genomic and cartography
GoldenPath hg38 (UCSC)CYTB  -  
GoldenPath hg19 (UCSC)CYTB  -  
EnsemblCYTB - [CytoView hg19]  CYTB - [CytoView hg38]
Mapping of homologs : NCBICYTB [Mapview hg19]  CYTB [Mapview hg38]
OMIM516020   535000   540000   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CYTB
Gene ExpressionCYTB [ NCBI-GEO ]   CYTB [ EBI - ARRAY_EXPRESS ]   CYTB [ SEEK ]   CYTB [ MEM ]
Gene Expression Viewer (FireBrowse)CYTB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)4519
GTEX Portal (Tissue expression)CYTB
Protein : pattern, domain, 3D structure
UniProt/SwissProtP00156   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP00156  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP00156
Splice isoforms : SwissVarP00156
PhosPhoSitePlusP00156
Domaine pattern : Prosite (Expaxy)CYTB_CTER (PS51003)    CYTB_NTER (PS51002)   
Domains : Interpro (EBI)Cyt_b/b6_C    Cyt_b/b6_N    Cytb/b6-like    Cytochrome_b    Di-haem_cyt_TM   
Domain families : Pfam (Sanger)Cytochrom_B_C (PF00032)    Cytochrome_B (PF00033)   
Domain families : Pfam (NCBI)pfam00032    pfam00033   
Conserved Domain (NCBI)CYTB
DMDM Disease mutations4519
Blocks (Seattle)CYTB
SuperfamilyP00156
Peptide AtlasP00156
IPIIPI00015140   IPI00935962   IPI01019061   IPI00794525   
Protein Interaction databases
DIP (DOE-UCLA)P00156
IntAct (EBI)P00156
BioGRIDCYTB
STRING (EMBL)CYTB
ZODIACCYTB
Ontologies - Pathways
QuickGOP00156
Ontology : AmiGOresponse to hypoxia  mitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  response to heat  proton transport  animal organ regeneration  integral component of mitochondrial inner membrane  protein complex binding  response to cobalamin  response to glucagon  hyperosmotic salinity response  response to ethanol  response to cadmium ion  response to copper ion  response to mercury ion  metal ion binding  response to calcium ion  response to hyperoxia  
Ontology : EGO-EBIresponse to hypoxia  mitochondrion  mitochondrial inner membrane  mitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  response to heat  proton transport  animal organ regeneration  integral component of mitochondrial inner membrane  protein complex binding  response to cobalamin  response to glucagon  hyperosmotic salinity response  response to ethanol  response to cadmium ion  response to copper ion  response to mercury ion  metal ion binding  response to calcium ion  response to hyperoxia  
NDEx NetworkCYTB
Atlas of Cancer Signalling NetworkCYTB
Wikipedia pathwaysCYTB
Orthology - Evolution
OrthoDB4519
Phylogenetic Trees/Animal Genes : TreeFamMT-CYB
HOVERGENP00156
HOGENOMP00156
Homologs : HomoloGeneCYTB
Homology/Alignments : Family Browser (UCSC)CYTB
Gene fusions - Rearrangements
Fusion : QuiverCYTB
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCYTB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CYTB
dbVarCYTB
ClinVarCYTB
1000_GenomesCYTB 
Exome Variant ServerCYTB
Genetic variants : HAPMAP4519
Genomic Variants (DGV)CYTB [DGVbeta]
DECIPHERCYTB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCYTB 
Mutations
ICGC Data PortalMT-CYB 
TCGA Data PortalMT-CYB 
Broad Tumor PortalMT-CYB
OASIS PortalMT-CYB [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDMT-CYB
BioMutasearch CYTB
DgiDB (Drug Gene Interaction Database)CYTB
DoCM (Curated mutations)CYTB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CYTB (select a term)
intoGenCYTB
Cancer3DCYTB(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM516020    535000    540000   
Orphanet
DisGeNETCYTB
MedgenCYTB
Genetic Testing Registry CYTB
NextProtP00156 [Medical]
TSGene4519
GENETestsCYTB
Target ValidationCYTB
Huge Navigator MT-CYB [HugePedia]
snp3D : Map Gene to Disease4519
BioCentury BCIQCYTB
ClinGenCYTB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD4519
Chemical/Pharm GKB GenePA31234
Clinical trialCYTB
Miscellaneous
canSAR (ICR)CYTB (select the gene name)
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCYTB
EVEXCYTB
GoPubMedCYTB
iHOPCYTB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jun 22 16:21:50 CEST 2018

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