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DALRD3 (DALR anticodon binding domain containing 3)

Identity

Alias_symbol (synonym)FLJ10496
Other alias-
HGNC (Hugo) DALRD3
LocusID (NCBI) 55152
Atlas_Id 62285
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 49015489 and ends at 49018608 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DALRD3   25536
Cards
Entrez_Gene (NCBI)DALRD3  55152  DALR anticodon binding domain containing 3
Aliases
GeneCards (Weizmann)DALRD3
Ensembl hg19 (Hinxton)ENSG00000178149 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000178149 [Gene_View]  chr3:49015489-49018608 [Contig_View]  DALRD3 [Vega]
ICGC DataPortalENSG00000178149
TCGA cBioPortalDALRD3
AceView (NCBI)DALRD3
Genatlas (Paris)DALRD3
WikiGenes55152
SOURCE (Princeton)DALRD3
Genetics Home Reference (NIH)DALRD3
Genomic and cartography
GoldenPath hg38 (UCSC)DALRD3  -     chr3:49015489-49018608 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DALRD3  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblDALRD3 - 3p21.31 [CytoView hg19]  DALRD3 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIDALRD3 [Mapview hg19]  DALRD3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA553582 AK001358 AK093054 AK093204 AK093294
RefSeq transcript (Entrez)NM_001009996 NM_001276405 NM_018114
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DALRD3
Cluster EST : UnigeneHs.745143 [ NCBI ]
CGAP (NCI)Hs.745143
Alternative Splicing GalleryENSG00000178149
Gene ExpressionDALRD3 [ NCBI-GEO ]   DALRD3 [ EBI - ARRAY_EXPRESS ]   DALRD3 [ SEEK ]   DALRD3 [ MEM ]
Gene Expression Viewer (FireBrowse)DALRD3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55152
GTEX Portal (Tissue expression)DALRD3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5D0E6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5D0E6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5D0E6
Splice isoforms : SwissVarQ5D0E6
PhosPhoSitePlusQ5D0E6
Domains : Interpro (EBI)DALR_anticod-bd    tRNAsynth_Ia_anticodon-bd   
Domain families : Pfam (Sanger)DALR_1 (PF05746)   
Domain families : Pfam (NCBI)pfam05746   
Domain families : Smart (EMBL)DALR_1 (SM00836)  
Conserved Domain (NCBI)DALRD3
DMDM Disease mutations55152
Blocks (Seattle)DALRD3
SuperfamilyQ5D0E6
Human Protein AtlasENSG00000178149
Peptide AtlasQ5D0E6
HPRD08549
IPIIPI00385311   IPI00645243   IPI00329164   IPI00796826   IPI00924543   IPI00927636   IPI00927423   
Protein Interaction databases
DIP (DOE-UCLA)Q5D0E6
IntAct (EBI)Q5D0E6
FunCoupENSG00000178149
BioGRIDDALRD3
STRING (EMBL)DALRD3
ZODIACDALRD3
Ontologies - Pathways
QuickGOQ5D0E6
Ontology : AmiGOarginine-tRNA ligase activity  protein binding  ATP binding  arginyl-tRNA aminoacylation  
Ontology : EGO-EBIarginine-tRNA ligase activity  protein binding  ATP binding  arginyl-tRNA aminoacylation  
NDEx NetworkDALRD3
Atlas of Cancer Signalling NetworkDALRD3
Wikipedia pathwaysDALRD3
Orthology - Evolution
OrthoDB55152
GeneTree (enSembl)ENSG00000178149
Phylogenetic Trees/Animal Genes : TreeFamDALRD3
HOVERGENQ5D0E6
HOGENOMQ5D0E6
Homologs : HomoloGeneDALRD3
Homology/Alignments : Family Browser (UCSC)DALRD3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDALRD3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DALRD3
dbVarDALRD3
ClinVarDALRD3
1000_GenomesDALRD3 
Exome Variant ServerDALRD3
ExAC (Exome Aggregation Consortium)DALRD3 (select the gene name)
Genetic variants : HAPMAP55152
Genomic Variants (DGV)DALRD3 [DGVbeta]
DECIPHERDALRD3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDALRD3 
Mutations
ICGC Data PortalDALRD3 
TCGA Data PortalDALRD3 
Broad Tumor PortalDALRD3
OASIS PortalDALRD3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDALRD3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDALRD3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DALRD3
DgiDB (Drug Gene Interaction Database)DALRD3
DoCM (Curated mutations)DALRD3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DALRD3 (select a term)
intoGenDALRD3
Cancer3DDALRD3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDALRD3
Genetic Testing Registry DALRD3
NextProtQ5D0E6 [Medical]
TSGene55152
GENETestsDALRD3
Target ValidationDALRD3
Huge Navigator DALRD3 [HugePedia]
snp3D : Map Gene to Disease55152
BioCentury BCIQDALRD3
ClinGenDALRD3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55152
Chemical/Pharm GKB GenePA134921814
Clinical trialDALRD3
Miscellaneous
canSAR (ICR)DALRD3 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDALRD3
EVEXDALRD3
GoPubMedDALRD3
iHOPDALRD3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:48 CEST 2017

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