Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DANT2 (DXZ4 associated non-coding transcript 2, distal)

Identity

Other alias-
HGNC (Hugo) DANT2
LocusID (NCBI) 642776
Atlas_Id 77805
Location Xq23  [Link to chromosome band Xq23]
Location_base_pair Starts at 115917271 and ends at 115969111 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DANT2   50862
Cards
Entrez_Gene (NCBI)DANT2  642776  DXZ4 associated non-coding transcript 2, distal
Aliases
GeneCards (Weizmann)DANT2
Ensembl hg19 (Hinxton)ENSG00000235244 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000235244 [Gene_View]  chrX:115917271-115969111 [Contig_View]  DANT2 [Vega]
ICGC DataPortalENSG00000235244
TCGA cBioPortalDANT2
AceView (NCBI)DANT2
Genatlas (Paris)DANT2
WikiGenes642776
SOURCE (Princeton)DANT2
Genetics Home Reference (NIH)DANT2
Genomic and cartography
GoldenPath hg38 (UCSC)DANT2  -     chrX:115917271-115969111 -  Xq23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DANT2  -     Xq23   [Description]    (hg19-Feb_2009)
EnsemblDANT2 - Xq23 [CytoView hg19]  DANT2 - Xq23 [CytoView hg38]
Mapping of homologs : NCBIDANT2 [Mapview hg19]  DANT2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC003645 BE297956 BM925596 BX642309 KM192214
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DANT2
Cluster EST : UnigeneHs.634316 [ NCBI ]
CGAP (NCI)Hs.634316
Alternative Splicing GalleryENSG00000235244
Gene ExpressionDANT2 [ NCBI-GEO ]   DANT2 [ EBI - ARRAY_EXPRESS ]   DANT2 [ SEEK ]   DANT2 [ MEM ]
Gene Expression Viewer (FireBrowse)DANT2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)642776
GTEX Portal (Tissue expression)DANT2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTK2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTK2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTK2
Splice isoforms : SwissVarQ9BTK2
PhosPhoSitePlusQ9BTK2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DANT2
DMDM Disease mutations642776
Blocks (Seattle)DANT2
SuperfamilyQ9BTK2
Human Protein AtlasENSG00000235244
Peptide AtlasQ9BTK2
IPIIPI00186192   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTK2
IntAct (EBI)Q9BTK2
FunCoupENSG00000235244
BioGRIDDANT2
STRING (EMBL)DANT2
ZODIACDANT2
Ontologies - Pathways
QuickGOQ9BTK2
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkDANT2
Atlas of Cancer Signalling NetworkDANT2
Wikipedia pathwaysDANT2
Orthology - Evolution
OrthoDB642776
GeneTree (enSembl)ENSG00000235244
Phylogenetic Trees/Animal Genes : TreeFamDANT2
HOVERGENQ9BTK2
HOGENOMQ9BTK2
Homologs : HomoloGeneDANT2
Homology/Alignments : Family Browser (UCSC)DANT2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDANT2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DANT2
dbVarDANT2
ClinVarDANT2
1000_GenomesDANT2 
Exome Variant ServerDANT2
ExAC (Exome Aggregation Consortium)DANT2 (select the gene name)
Genetic variants : HAPMAP642776
Genomic Variants (DGV)DANT2 [DGVbeta]
DECIPHERDANT2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDANT2 
Mutations
ICGC Data PortalDANT2 
TCGA Data PortalDANT2 
Broad Tumor PortalDANT2
OASIS PortalDANT2 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDANT2
BioMutasearch DANT2
DgiDB (Drug Gene Interaction Database)DANT2
DoCM (Curated mutations)DANT2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DANT2 (select a term)
intoGenDANT2
Cancer3DDANT2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDANT2
Genetic Testing Registry DANT2
NextProtQ9BTK2 [Medical]
TSGene642776
GENETestsDANT2
Target ValidationDANT2
Huge Navigator DANT2 [HugePedia]
snp3D : Map Gene to Disease642776
BioCentury BCIQDANT2
ClinGenDANT2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642776
Clinical trialDANT2
Miscellaneous
canSAR (ICR)DANT2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDANT2
EVEXDANT2
GoPubMedDANT2
iHOPDANT2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:05:49 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.