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DAO (D-amino acid oxidase)

Identity

Alias_symbol (synonym)DAMOX
Other aliasDAAO
OXDA
HGNC (Hugo) DAO
LocusID (NCBI) 1610
Atlas_Id 53173
Location 12q24.11  [Link to chromosome band 12q24]
Location_base_pair Starts at 108880081 and ends at 108900934 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MT1G (16q13) / DAO (12q24.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DAO   2671
Cards
Entrez_Gene (NCBI)DAO  1610  D-amino acid oxidase
AliasesDAAO; DAMOX; OXDA
GeneCards (Weizmann)DAO
Ensembl hg19 (Hinxton)ENSG00000110887 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000110887 [Gene_View]  chr12:108880081-108900934 [Contig_View]  DAO [Vega]
ICGC DataPortalENSG00000110887
TCGA cBioPortalDAO
AceView (NCBI)DAO
Genatlas (Paris)DAO
WikiGenes1610
SOURCE (Princeton)DAO
Genetics Home Reference (NIH)DAO
Genomic and cartography
GoldenPath hg38 (UCSC)DAO  -     chr12:108880081-108900934 +  12q24.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DAO  -     12q24.11   [Description]    (hg19-Feb_2009)
EnsemblDAO - 12q24.11 [CytoView hg19]  DAO - 12q24.11 [CytoView hg38]
Mapping of homologs : NCBIDAO [Mapview hg19]  DAO [Mapview hg38]
OMIM124050   181500   
Gene and transcription
Genbank (Entrez)AK312995 AX741655 AX741656 AX741658 AX741659
RefSeq transcript (Entrez)NM_001917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DAO
Cluster EST : UnigeneHs.113227 [ NCBI ]
CGAP (NCI)Hs.113227
Alternative Splicing GalleryENSG00000110887
Gene ExpressionDAO [ NCBI-GEO ]   DAO [ EBI - ARRAY_EXPRESS ]   DAO [ SEEK ]   DAO [ MEM ]
Gene Expression Viewer (FireBrowse)DAO [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1610
GTEX Portal (Tissue expression)DAO
Protein : pattern, domain, 3D structure
UniProt/SwissProtP14920   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP14920  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP14920
Splice isoforms : SwissVarP14920
PhosPhoSitePlusP14920
Domaine pattern : Prosite (Expaxy)DAO (PS00677)   
Domains : Interpro (EBI)D-amino_acid_oxidase_CS    DAO    FAD-dep_OxRdtase    FAD/NAD-binding_dom   
Domain families : Pfam (Sanger)DAO (PF01266)   
Domain families : Pfam (NCBI)pfam01266   
Conserved Domain (NCBI)DAO
DMDM Disease mutations1610
Blocks (Seattle)DAO
PDB (SRS)2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
PDB (PDBSum)2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
PDB (IMB)2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
PDB (RSDB)2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
Structural Biology KnowledgeBase2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
SCOP (Structural Classification of Proteins)2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
CATH (Classification of proteins structures)2DU8    2E48    2E49    2E4A    2E82    2GNZ    3CUK    3G3E    3W4I    3W4J    3W4K    3ZNN    3ZNO    3ZNP    3ZNQ    4QFC    4QFD   
SuperfamilyP14920
Human Protein AtlasENSG00000110887
Peptide AtlasP14920
HPRD15917
IPIIPI00295438   IPI01020683   IPI01022937   IPI01022772   IPI01021161   IPI01021021   
Protein Interaction databases
DIP (DOE-UCLA)P14920
IntAct (EBI)P14920
FunCoupENSG00000110887
BioGRIDDAO
STRING (EMBL)DAO
ZODIACDAO
Ontologies - Pathways
QuickGOP14920
Ontology : AmiGOD-amino-acid oxidase activity  D-amino-acid oxidase activity  receptor binding  protein binding  mitochondrial outer membrane  peroxisome  peroxisomal membrane  peroxisomal matrix  cytosol  proline catabolic process  D-serine catabolic process  dopamine biosynthetic process  glyoxylate metabolic process  protein dimerization activity  cofactor binding  oxidation-reduction process  D-alanine catabolic process  D-serine metabolic process  FAD binding  
Ontology : EGO-EBID-amino-acid oxidase activity  D-amino-acid oxidase activity  receptor binding  protein binding  mitochondrial outer membrane  peroxisome  peroxisomal membrane  peroxisomal matrix  cytosol  proline catabolic process  D-serine catabolic process  dopamine biosynthetic process  glyoxylate metabolic process  protein dimerization activity  cofactor binding  oxidation-reduction process  D-alanine catabolic process  D-serine metabolic process  FAD binding  
Pathways : KEGGGlycine, serine and threonine metabolism    Arginine and proline metabolism    D-Arginine and D-ornithine metabolism    Peroxisome   
NDEx NetworkDAO
Atlas of Cancer Signalling NetworkDAO
Wikipedia pathwaysDAO
Orthology - Evolution
OrthoDB1610
GeneTree (enSembl)ENSG00000110887
Phylogenetic Trees/Animal Genes : TreeFamDAO
HOVERGENP14920
HOGENOMP14920
Homologs : HomoloGeneDAO
Homology/Alignments : Family Browser (UCSC)DAO
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDAO [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DAO
dbVarDAO
ClinVarDAO
1000_GenomesDAO 
Exome Variant ServerDAO
ExAC (Exome Aggregation Consortium)DAO (select the gene name)
Genetic variants : HAPMAP1610
Genomic Variants (DGV)DAO [DGVbeta]
DECIPHERDAO [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDAO 
Mutations
ICGC Data PortalDAO 
TCGA Data PortalDAO 
Broad Tumor PortalDAO
OASIS PortalDAO [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDAO  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDAO
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DAO
DgiDB (Drug Gene Interaction Database)DAO
DoCM (Curated mutations)DAO (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DAO (select a term)
intoGenDAO
Cancer3DDAO(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM124050    181500   
Orphanet106   
MedgenDAO
Genetic Testing Registry DAO
NextProtP14920 [Medical]
TSGene1610
GENETestsDAO
Target ValidationDAO
Huge Navigator DAO [HugePedia]
snp3D : Map Gene to Disease1610
BioCentury BCIQDAO
ClinGenDAO
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1610
Chemical/Pharm GKB GenePA27139
Clinical trialDAO
Miscellaneous
canSAR (ICR)DAO (select the gene name)
Probes
Litterature
PubMed79 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDAO
EVEXDAO
GoPubMedDAO
iHOPDAO
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed Jun 7 12:30:34 CEST 2017

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