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DAOA (D-amino acid oxidase activator)

Identity

Alias_symbol (synonym)G72
Other aliasLG72
SG72
HGNC (Hugo) DAOA
LocusID (NCBI) 267012
Atlas_Id 62287
Location 13q33.2  [Link to chromosome band 13q33]
Location_base_pair Starts at 106118565 and ends at 106143383 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DAOA   21191
Cards
Entrez_Gene (NCBI)DAOA  267012  D-amino acid oxidase activator
AliasesLG72; SG72
GeneCards (Weizmann)DAOA
Ensembl hg19 (Hinxton)ENSG00000182346 [Gene_View]  chr13:106118565-106143383 [Contig_View]  DAOA [Vega]
Ensembl hg38 (Hinxton)ENSG00000182346 [Gene_View]  chr13:106118565-106143383 [Contig_View]  DAOA [Vega]
ICGC DataPortalENSG00000182346
TCGA cBioPortalDAOA
AceView (NCBI)DAOA
Genatlas (Paris)DAOA
WikiGenes267012
SOURCE (Princeton)DAOA
Genetics Home Reference (NIH)DAOA
Genomic and cartography
GoldenPath hg19 (UCSC)DAOA  -     chr13:106118565-106143383 +  13q33.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DAOA  -     13q33.2   [Description]    (hg38-Dec_2013)
EnsemblDAOA - 13q33.2 [CytoView hg19]  DAOA - 13q33.2 [CytoView hg38]
Mapping of homologs : NCBIDAOA [Mapview hg19]  DAOA [Mapview hg38]
OMIM181500   607408   
Gene and transcription
Genbank (Entrez)AY138546 AY138547 AY170469 AY170470 AY170471
RefSeq transcript (Entrez)NM_001161812 NM_001161814 NM_172370
RefSeq genomic (Entrez)NC_000013 NC_018924 NG_012694 NT_009952 NW_004929389
Consensus coding sequences : CCDS (NCBI)DAOA
Cluster EST : UnigeneHs.381382 [ NCBI ]
CGAP (NCI)Hs.381382
Alternative Splicing GalleryENSG00000182346
Gene ExpressionDAOA [ NCBI-GEO ]   DAOA [ EBI - ARRAY_EXPRESS ]   DAOA [ SEEK ]   DAOA [ MEM ]
Gene Expression Viewer (FireBrowse)DAOA [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)267012
GTEX Portal (Tissue expression)DAOA
Protein : pattern, domain, 3D structure
UniProt/SwissProtP59103   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP59103  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP59103
Splice isoforms : SwissVarP59103
PhosPhoSitePlusP59103
Domains : Interpro (EBI)DAOA   
Domain families : Pfam (Sanger)DAOA (PF15199)   
Domain families : Pfam (NCBI)pfam15199   
Conserved Domain (NCBI)DAOA
DMDM Disease mutations267012
Blocks (Seattle)DAOA
SuperfamilyP59103
Human Protein AtlasENSG00000182346
Peptide AtlasP59103
HPRD07591
IPIIPI00171483   IPI00218119   IPI00829995   IPI00936316   
Protein Interaction databases
DIP (DOE-UCLA)P59103
IntAct (EBI)P59103
FunCoupENSG00000182346
BioGRIDDAOA
STRING (EMBL)DAOA
ZODIACDAOA
Ontologies - Pathways
QuickGOP59103
Ontology : AmiGOmitochondrion  Golgi apparatus  enzyme activator activity  enzyme binding  positive regulation of catalytic activity  perinuclear region of cytoplasm  negative regulation of D-amino-acid oxidase activity  
Ontology : EGO-EBImitochondrion  Golgi apparatus  enzyme activator activity  enzyme binding  positive regulation of catalytic activity  perinuclear region of cytoplasm  negative regulation of D-amino-acid oxidase activity  
NDEx NetworkDAOA
Atlas of Cancer Signalling NetworkDAOA
Wikipedia pathwaysDAOA
Orthology - Evolution
OrthoDB267012
GeneTree (enSembl)ENSG00000182346
Phylogenetic Trees/Animal Genes : TreeFamDAOA
HOVERGENP59103
HOGENOMP59103
Homologs : HomoloGeneDAOA
Homology/Alignments : Family Browser (UCSC)DAOA
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDAOA [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DAOA
dbVarDAOA
ClinVarDAOA
1000_GenomesDAOA 
Exome Variant ServerDAOA
ExAC (Exome Aggregation Consortium)DAOA (select the gene name)
Genetic variants : HAPMAP267012
Genomic Variants (DGV)DAOA [DGVbeta]
DECIPHER (Syndromes)13:106118565-106143383  ENSG00000182346
CONAN: Copy Number AnalysisDAOA 
Mutations
ICGC Data PortalDAOA 
TCGA Data PortalDAOA 
Broad Tumor PortalDAOA
OASIS PortalDAOA [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDAOA  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDAOA
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DAOA
DgiDB (Drug Gene Interaction Database)DAOA
DoCM (Curated mutations)DAOA (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DAOA (select a term)
intoGenDAOA
Cancer3DDAOA(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM181500    607408   
Orphanet
MedgenDAOA
Genetic Testing Registry DAOA
NextProtP59103 [Medical]
TSGene267012
GENETestsDAOA
Huge Navigator DAOA [HugePedia]
snp3D : Map Gene to Disease267012
BioCentury BCIQDAOA
ClinGenDAOA
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD267012
Chemical/Pharm GKB GenePA134924986
Clinical trialDAOA
Miscellaneous
canSAR (ICR)DAOA (select the gene name)
Probes
Litterature
PubMed115 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDAOA
EVEXDAOA
GoPubMedDAOA
iHOPDAOA
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:00 CET 2017

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