Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DAP (death-associated protein)

Identity

Other names-
HGNC (Hugo) DAP
LocusID (NCBI) 1611
Location 5p15.2
Location_base_pair Starts at 10679342 and ends at 10761387 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)DAP   2672
Cards
Entrez_Gene (NCBI)DAP  1611  death-associated protein
GeneCards (Weizmann)DAP
Ensembl (Hinxton)ENSG00000112977 [Gene_View]  chr5:10679342-10761387 [Contig_View]  DAP [Vega]
ICGC DataPortalENSG00000112977
cBioPortalDAP
AceView (NCBI)DAP
Genatlas (Paris)DAP
WikiGenes1611
SOURCE (Princeton)NM_001291963 NM_004394
Genomic and cartography
GoldenPath (UCSC)DAP  -  5p15.2   chr5:10679342-10761387 -  5p15.2   [Description]    (hg19-Feb_2009)
EnsemblDAP - 5p15.2 [CytoView]
Mapping of homologs : NCBIDAP [Mapview]
OMIM600954   
Gene and transcription
Genbank (Entrez)AK298670 AK311783 BC002726 BI823002 BP265421
RefSeq transcript (Entrez)NM_001291963 NM_004394
RefSeq genomic (Entrez)AC_000137 NC_000005 NC_018916 NG_011546 NT_006576 NW_001838927 NW_004929321
Consensus coding sequences : CCDS (NCBI)DAP
Cluster EST : UnigeneHs.75189 [ NCBI ]
CGAP (NCI)Hs.75189
Alternative Splicing : Fast-db (Paris)GSHG0024655
Alternative Splicing GalleryENSG00000112977
Gene ExpressionDAP [ NCBI-GEO ]     DAP [ SEEK ]   DAP [ MEM ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP51397 (Uniprot)
NextProtP51397  [Medical]
With graphics : InterProP51397
Splice isoforms : SwissVarP51397 (Swissvar)
Domains : Interpro (EBI)DAP1/DAPL1 [organisation]  
Related proteins : CluSTrP51397
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
DMDM Disease mutations1611
Blocks (Seattle)P51397
Human Protein AtlasENSG00000112977 [gene] [tissue] [antibody] [cell] [cancer]
Peptide AtlasP51397
HPRD02977
IPIIPI00018117   IPI00030844   IPI00911094   
Protein Interaction databases
DIP (DOE-UCLA)P51397
IntAct (EBI)P51397
FunCoupENSG00000112977
BioGRIDDAP
InParanoidP51397
Interologous Interaction database P51397
IntegromeDBDAP
STRING (EMBL)DAP
Ontologies - Pathways
Ontology : AmiGOautophagy  apoptotic process  activation of cysteine-type endopeptidase activity involved in apoptotic process  negative regulation of autophagy  negative regulation of NF-kappaB transcription factor activity  cellular response to amino acid starvation  negative regulation of transcription, DNA-templated  death domain binding  apoptotic signaling pathway  
Ontology : EGO-EBIautophagy  apoptotic process  activation of cysteine-type endopeptidase activity involved in apoptotic process  negative regulation of autophagy  negative regulation of NF-kappaB transcription factor activity  cellular response to amino acid starvation  negative regulation of transcription, DNA-templated  death domain binding  apoptotic signaling pathway  
Protein Interaction DatabaseDAP
Wikipedia pathwaysDAP
Gene fusion - rearrangments
Polymorphisms : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)DAP
snp3D : Map Gene to Disease1611
SNP (GeneSNP Utah)DAP
SNP : HGBaseDAP
Genetic variants : HAPMAPDAP
Exome VariantDAP
1000_GenomesDAP 
ICGC programENSG00000112977 
Somatic Mutations in Cancer : COSMICDAP 
CONAN: Copy Number AnalysisDAP 
Mutations and Diseases : HGMDDAP
Genomic VariantsDAP  DAP [DGVbeta]
dbVarDAP
ClinVarDAP
Pred. of missensesPolyPhen-2  SIFT(SG)  SIFT(JCVI)  Align-GVGD  MutAssessor  Mutanalyser  
Pred. splicesGeneSplicer  Human Splicing Finder  MaxEntScan  
Diseases
OMIM600954   
MedgenDAP
GENETestsDAP
Disease Genetic AssociationDAP
Huge Navigator DAP [HugePedia]  DAP [HugeCancerGEM]
General knowledge
Homologs : HomoloGeneDAP
Homology/Alignments : Family Browser (UCSC)DAP
Phylogenetic Trees/Animal Genes : TreeFamDAP
Chemical/Protein Interactions : CTD1611
Chemical/Pharm GKB GenePA27140
Clinical trialDAP
Cancer Resource (Charite)ENSG00000112977
Other databases
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
CoreMineDAP
iHOPDAP
OncoSearchDAP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated12-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Jul 26 14:29:15 CEST 2014

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