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DAPK1-IT1 (DAPK1 intronic transcript 1)

Identity

Alias_namesDAPK1 intronic transcript 1 (non-protein coding)
Other alias-
HGNC (Hugo) DAPK1-IT1
LocusID (NCBI) 100506897
Atlas_Id 79752
Location 9q21.33  [Link to chromosome band 9q21]
Location_base_pair Starts at 87553454 and ends at 87554448 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)DAPK1-IT1   43591
Cards
Entrez_Gene (NCBI)DAPK1-IT1  100506897  DAPK1 intronic transcript 1
Aliases
GeneCards (Weizmann)DAPK1-IT1
Ensembl hg19 (Hinxton)ENSG00000236709 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236709 [Gene_View]  chr9:87553454-87554448 [Contig_View]  DAPK1-IT1 [Vega]
ICGC DataPortalENSG00000236709
TCGA cBioPortalDAPK1-IT1
AceView (NCBI)DAPK1-IT1
Genatlas (Paris)DAPK1-IT1
WikiGenes100506897
SOURCE (Princeton)DAPK1-IT1
Genetics Home Reference (NIH)DAPK1-IT1
Genomic and cartography
GoldenPath hg38 (UCSC)DAPK1-IT1  -     chr9:87553454-87554448 +  9q21.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DAPK1-IT1  -     9q21.33   [Description]    (hg19-Feb_2009)
EnsemblDAPK1-IT1 - 9q21.33 [CytoView hg19]  DAPK1-IT1 - 9q21.33 [CytoView hg38]
Mapping of homologs : NCBIDAPK1-IT1 [Mapview hg19]  DAPK1-IT1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BQ025444
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DAPK1-IT1
Cluster EST : UnigeneHs.656160 [ NCBI ]
CGAP (NCI)Hs.656160
Alternative Splicing GalleryENSG00000236709
Gene ExpressionDAPK1-IT1 [ NCBI-GEO ]   DAPK1-IT1 [ EBI - ARRAY_EXPRESS ]   DAPK1-IT1 [ SEEK ]   DAPK1-IT1 [ MEM ]
Gene Expression Viewer (FireBrowse)DAPK1-IT1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100506897
GTEX Portal (Tissue expression)DAPK1-IT1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DAPK1-IT1
DMDM Disease mutations100506897
Blocks (Seattle)DAPK1-IT1
Human Protein AtlasENSG00000236709
Protein Interaction databases
FunCoupENSG00000236709
BioGRIDDAPK1-IT1
STRING (EMBL)DAPK1-IT1
ZODIACDAPK1-IT1
Ontologies - Pathways
Huge Navigator DAPK1-IT1 [HugePedia]
snp3D : Map Gene to Disease100506897
BioCentury BCIQDAPK1-IT1
ClinGenDAPK1-IT1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100506897
Clinical trialDAPK1-IT1
Miscellaneous
canSAR (ICR)DAPK1-IT1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDAPK1-IT1
EVEXDAPK1-IT1
GoPubMedDAPK1-IT1
iHOPDAPK1-IT1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:49 CEST 2017

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