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DAW1 (dynein assembly factor with WD repeats 1)

Identity

Alias_namesWDR69
WD repeat domain 69
Alias_symbol (synonym)FLJ25955
ODA16
Other alias
HGNC (Hugo) DAW1
LocusID (NCBI) 164781
Atlas_Id 62293
Location 2q36.3  [Link to chromosome band 2q36]
Location_base_pair Starts at 227871376 and ends at 227924343 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DAW1   26383
Cards
Entrez_Gene (NCBI)DAW1  164781  dynein assembly factor with WD repeats 1
AliasesODA16; WDR69
GeneCards (Weizmann)DAW1
Ensembl hg19 (Hinxton)ENSG00000123977 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000123977 [Gene_View]  chr2:227871376-227924343 [Contig_View]  DAW1 [Vega]
ICGC DataPortalENSG00000123977
TCGA cBioPortalDAW1
AceView (NCBI)DAW1
Genatlas (Paris)DAW1
WikiGenes164781
SOURCE (Princeton)DAW1
Genetics Home Reference (NIH)DAW1
Genomic and cartography
GoldenPath hg38 (UCSC)DAW1  -     chr2:227871376-227924343 +  2q36.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DAW1  -     2q36.3   [Description]    (hg19-Feb_2009)
EnsemblDAW1 - 2q36.3 [CytoView hg19]  DAW1 - 2q36.3 [CytoView hg38]
Mapping of homologs : NCBIDAW1 [Mapview hg19]  DAW1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097409 AK098821 AK127882 AK301861 BC036377
RefSeq transcript (Entrez)NM_001330004 NM_178821
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DAW1
Cluster EST : UnigeneHs.424594 [ NCBI ]
CGAP (NCI)Hs.424594
Alternative Splicing GalleryENSG00000123977
Gene ExpressionDAW1 [ NCBI-GEO ]   DAW1 [ EBI - ARRAY_EXPRESS ]   DAW1 [ SEEK ]   DAW1 [ MEM ]
Gene Expression Viewer (FireBrowse)DAW1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)164781
GTEX Portal (Tissue expression)DAW1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N136   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N136  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N136
Splice isoforms : SwissVarQ8N136
PhosPhoSitePlusQ8N136
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)G-protein_beta_WD-40_rep    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)DAW1
DMDM Disease mutations164781
Blocks (Seattle)DAW1
SuperfamilyQ8N136
Human Protein AtlasENSG00000123977
Peptide AtlasQ8N136
HPRD08079
IPIIPI00166063   IPI00444233   IPI01012716   IPI00953188   IPI00915936   IPI00916844   
Protein Interaction databases
DIP (DOE-UCLA)Q8N136
IntAct (EBI)Q8N136
FunCoupENSG00000123977
BioGRIDDAW1
STRING (EMBL)DAW1
ZODIACDAW1
Ontologies - Pathways
QuickGOQ8N136
Ontology : AmiGOcytoplasm  cilium  determination of left/right symmetry  heart development  
Ontology : EGO-EBIcytoplasm  cilium  determination of left/right symmetry  heart development  
NDEx NetworkDAW1
Atlas of Cancer Signalling NetworkDAW1
Wikipedia pathwaysDAW1
Orthology - Evolution
OrthoDB164781
GeneTree (enSembl)ENSG00000123977
Phylogenetic Trees/Animal Genes : TreeFamDAW1
HOVERGENQ8N136
HOGENOMQ8N136
Homologs : HomoloGeneDAW1
Homology/Alignments : Family Browser (UCSC)DAW1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDAW1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DAW1
dbVarDAW1
ClinVarDAW1
1000_GenomesDAW1 
Exome Variant ServerDAW1
ExAC (Exome Aggregation Consortium)DAW1 (select the gene name)
Genetic variants : HAPMAP164781
Genomic Variants (DGV)DAW1 [DGVbeta]
DECIPHERDAW1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDAW1 
Mutations
ICGC Data PortalDAW1 
TCGA Data PortalDAW1 
Broad Tumor PortalDAW1
OASIS PortalDAW1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDAW1
BioMutasearch DAW1
DgiDB (Drug Gene Interaction Database)DAW1
DoCM (Curated mutations)DAW1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DAW1 (select a term)
intoGenDAW1
Cancer3DDAW1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDAW1
Genetic Testing Registry DAW1
NextProtQ8N136 [Medical]
TSGene164781
GENETestsDAW1
Target ValidationDAW1
Huge Navigator DAW1 [HugePedia]
snp3D : Map Gene to Disease164781
BioCentury BCIQDAW1
ClinGenDAW1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD164781
Chemical/Pharm GKB GenePA142670602
Clinical trialDAW1
Miscellaneous
canSAR (ICR)DAW1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDAW1
EVEXDAW1
GoPubMedDAW1
iHOPDAW1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:15 CEST 2017

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