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DAZ2 (deleted in azoospermia 2)

Identity

Alias_symbol (synonym)pDP1678
MGC126442
Other alias
HGNC (Hugo) DAZ2
LocusID (NCBI) 57055
Atlas_Id 62295
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 23219457 and ends at 23291356 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DAZ2   15964
Cards
Entrez_Gene (NCBI)DAZ2  57055  deleted in azoospermia 2
AliasespDP1678
GeneCards (Weizmann)DAZ2
Ensembl hg19 (Hinxton)ENSG00000205944 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205944 [Gene_View]  chrY:23219457-23291356 [Contig_View]  DAZ2 [Vega]
ICGC DataPortalENSG00000205944
TCGA cBioPortalDAZ2
AceView (NCBI)DAZ2
Genatlas (Paris)DAZ2
WikiGenes57055
SOURCE (Princeton)DAZ2
Genetics Home Reference (NIH)DAZ2
Genomic and cartography
GoldenPath hg38 (UCSC)DAZ2  -     chrY:23219457-23291356 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DAZ2  -     Yq11.223   [Description]    (hg19-Feb_2009)
EnsemblDAZ2 - Yq11.223 [CytoView hg19]  DAZ2 - Yq11.223 [CytoView hg38]
Mapping of homologs : NCBIDAZ2 [Mapview hg19]  DAZ2 [Mapview hg38]
OMIM400026   415000   
Gene and transcription
Genbank (Entrez)AF248480 AF414184 AK302398 AK302690 BC113006
RefSeq transcript (Entrez)NM_001005785 NM_001005786 NM_020363
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DAZ2
Cluster EST : UnigeneHs.592257 [ NCBI ]
CGAP (NCI)Hs.592257
Alternative Splicing GalleryENSG00000205944
Gene ExpressionDAZ2 [ NCBI-GEO ]   DAZ2 [ EBI - ARRAY_EXPRESS ]   DAZ2 [ SEEK ]   DAZ2 [ MEM ]
Gene Expression Viewer (FireBrowse)DAZ2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57055
GTEX Portal (Tissue expression)DAZ2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ13117   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ13117  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ13117
Splice isoforms : SwissVarQ13117
PhosPhoSitePlusQ13117
Domaine pattern : Prosite (Expaxy)RRM (PS50102)   
Domains : Interpro (EBI)Nucleotide-bd_a/b_plait    RRM_dom   
Domain families : Pfam (Sanger)RRM_1 (PF00076)   
Domain families : Pfam (NCBI)pfam00076   
Domain families : Smart (EMBL)RRM (SM00360)  
Conserved Domain (NCBI)DAZ2
DMDM Disease mutations57055
Blocks (Seattle)DAZ2
SuperfamilyQ13117
Human Protein AtlasENSG00000205944
Peptide AtlasQ13117
HPRD11848
IPIIPI00974525   
Protein Interaction databases
DIP (DOE-UCLA)Q13117
IntAct (EBI)Q13117
FunCoupENSG00000205944
BioGRIDDAZ2
STRING (EMBL)DAZ2
ZODIACDAZ2
Ontologies - Pathways
QuickGOQ13117
Ontology : AmiGORNA binding  nucleus  cytoplasm  multicellular organism development  spermatogenesis  single fertilization  cell differentiation  
Ontology : EGO-EBIRNA binding  nucleus  cytoplasm  multicellular organism development  spermatogenesis  single fertilization  cell differentiation  
NDEx NetworkDAZ2
Atlas of Cancer Signalling NetworkDAZ2
Wikipedia pathwaysDAZ2
Orthology - Evolution
OrthoDB57055
GeneTree (enSembl)ENSG00000205944
Phylogenetic Trees/Animal Genes : TreeFamDAZ2
HOVERGENQ13117
HOGENOMQ13117
Homologs : HomoloGeneDAZ2
Homology/Alignments : Family Browser (UCSC)DAZ2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDAZ2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DAZ2
dbVarDAZ2
ClinVarDAZ2
1000_GenomesDAZ2 
Exome Variant ServerDAZ2
ExAC (Exome Aggregation Consortium)DAZ2 (select the gene name)
Genetic variants : HAPMAP57055
Genomic Variants (DGV)DAZ2 [DGVbeta]
DECIPHERDAZ2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDAZ2 
Mutations
ICGC Data PortalDAZ2 
TCGA Data PortalDAZ2 
Broad Tumor PortalDAZ2
OASIS PortalDAZ2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDAZ2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDAZ2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DAZ2
DgiDB (Drug Gene Interaction Database)DAZ2
DoCM (Curated mutations)DAZ2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DAZ2 (select a term)
intoGenDAZ2
Cancer3DDAZ2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM400026    415000   
Orphanet257   
MedgenDAZ2
Genetic Testing Registry DAZ2
NextProtQ13117 [Medical]
TSGene57055
GENETestsDAZ2
Target ValidationDAZ2
Huge Navigator DAZ2 [HugePedia]
snp3D : Map Gene to Disease57055
BioCentury BCIQDAZ2
ClinGenDAZ2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57055
Chemical/Pharm GKB GenePA27150
Clinical trialDAZ2
Miscellaneous
canSAR (ICR)DAZ2 (select the gene name)
Probes
Litterature
PubMed35 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDAZ2
EVEXDAZ2
GoPubMedDAZ2
iHOPDAZ2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:50 CEST 2017

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