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DAZAP2 (DAZ associated protein 2)

Identity

Alias_symbol (synonym)KIAA0058
Other aliasPRTB
HGNC (Hugo) DAZAP2
LocusID (NCBI) 9802
Atlas_Id 62298
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 51238724 and ends at 51243933 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DAZAP2 (12q13.13) / ACTG1 (17q25.3)DAZAP2 (12q13.13) / BOLA2 (16p11.2)DAZAP2 (12q13.13) / DAZAP2 (12q13.13)
DAZAP2 (12q13.13) / DPP10 (2q14.1)DAZAP2 (12q13.13) / SEPW1 (19q13.33)DAZAP2 (12q13.13) / TCF4 (18q21.2)
EP300 (22q13.2) / DAZAP2 (12q13.13)MINK1 (17p13.2) / DAZAP2 (12q13.13)NRG1 (8p12) / DAZAP2 (12q13.13)
SMNDC1 (10q25.2) / DAZAP2 (12q13.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DAZAP2   2684
Cards
Entrez_Gene (NCBI)DAZAP2  9802  DAZ associated protein 2
AliasesPRTB
GeneCards (Weizmann)DAZAP2
Ensembl hg19 (Hinxton)ENSG00000183283 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000183283 [Gene_View]  chr12:51238724-51243933 [Contig_View]  DAZAP2 [Vega]
ICGC DataPortalENSG00000183283
TCGA cBioPortalDAZAP2
AceView (NCBI)DAZAP2
Genatlas (Paris)DAZAP2
WikiGenes9802
SOURCE (Princeton)DAZAP2
Genetics Home Reference (NIH)DAZAP2
Genomic and cartography
GoldenPath hg38 (UCSC)DAZAP2  -     chr12:51238724-51243933 +  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DAZAP2  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblDAZAP2 - 12q13.13 [CytoView hg19]  DAZAP2 - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBIDAZAP2 [Mapview hg19]  DAZAP2 [Mapview hg38]
OMIM607431   
Gene and transcription
Genbank (Entrez)AK095963 AK125855 AK290119 AK293330 AK303828
RefSeq transcript (Entrez)NM_001136264 NM_001136266 NM_001136267 NM_001136268 NM_001136269 NM_014764
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DAZAP2
Cluster EST : UnigeneHs.369761 [ NCBI ]
CGAP (NCI)Hs.369761
Alternative Splicing GalleryENSG00000183283
Gene ExpressionDAZAP2 [ NCBI-GEO ]   DAZAP2 [ EBI - ARRAY_EXPRESS ]   DAZAP2 [ SEEK ]   DAZAP2 [ MEM ]
Gene Expression Viewer (FireBrowse)DAZAP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)9802
GTEX Portal (Tissue expression)DAZAP2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15038   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15038  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15038
Splice isoforms : SwissVarQ15038
PhosPhoSitePlusQ15038
Domains : Interpro (EBI)DAZ_assoc-2   
Domain families : Pfam (Sanger)DAZAP2 (PF11029)   
Domain families : Pfam (NCBI)pfam11029   
Conserved Domain (NCBI)DAZAP2
DMDM Disease mutations9802
Blocks (Seattle)DAZAP2
SuperfamilyQ15038
Human Protein AtlasENSG00000183283
Peptide AtlasQ15038
HPRD08463
IPIIPI00006115   IPI01022678   IPI01022116   IPI01022972   IPI00790700   IPI00941613   IPI00914856   IPI00914867   IPI00790018   
Protein Interaction databases
DIP (DOE-UCLA)Q15038
IntAct (EBI)Q15038
FunCoupENSG00000183283
BioGRIDDAZAP2
STRING (EMBL)DAZAP2
ZODIACDAZAP2
Ontologies - Pathways
QuickGOQ15038
Ontology : AmiGOprotein binding  cytoplasm  nuclear speck  identical protein binding  WW domain binding  
Ontology : EGO-EBIprotein binding  cytoplasm  nuclear speck  identical protein binding  WW domain binding  
NDEx NetworkDAZAP2
Atlas of Cancer Signalling NetworkDAZAP2
Wikipedia pathwaysDAZAP2
Orthology - Evolution
OrthoDB9802
GeneTree (enSembl)ENSG00000183283
Phylogenetic Trees/Animal Genes : TreeFamDAZAP2
HOVERGENQ15038
HOGENOMQ15038
Homologs : HomoloGeneDAZAP2
Homology/Alignments : Family Browser (UCSC)DAZAP2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDAZAP2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DAZAP2
dbVarDAZAP2
ClinVarDAZAP2
1000_GenomesDAZAP2 
Exome Variant ServerDAZAP2
ExAC (Exome Aggregation Consortium)DAZAP2 (select the gene name)
Genetic variants : HAPMAP9802
Genomic Variants (DGV)DAZAP2 [DGVbeta]
DECIPHERDAZAP2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDAZAP2 
Mutations
ICGC Data PortalDAZAP2 
TCGA Data PortalDAZAP2 
Broad Tumor PortalDAZAP2
OASIS PortalDAZAP2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDAZAP2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDAZAP2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DAZAP2
DgiDB (Drug Gene Interaction Database)DAZAP2
DoCM (Curated mutations)DAZAP2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DAZAP2 (select a term)
intoGenDAZAP2
Cancer3DDAZAP2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607431   
Orphanet
MedgenDAZAP2
Genetic Testing Registry DAZAP2
NextProtQ15038 [Medical]
TSGene9802
GENETestsDAZAP2
Target ValidationDAZAP2
Huge Navigator DAZAP2 [HugePedia]
snp3D : Map Gene to Disease9802
BioCentury BCIQDAZAP2
ClinGenDAZAP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD9802
Chemical/Pharm GKB GenePA27154
Clinical trialDAZAP2
Miscellaneous
canSAR (ICR)DAZAP2 (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDAZAP2
EVEXDAZAP2
GoPubMedDAZAP2
iHOPDAZAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:50 CEST 2017

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