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DBI (diazepam binding inhibitor, acyl-CoA binding protein)

Identity

Alias_namesdiazepam binding inhibitor (GABA receptor modulator
Alias_symbol (synonym)ACBP
ACBD1
Other aliasCCK-RP
EP
HGNC (Hugo) DBI
LocusID (NCBI) 1622
Atlas_Id 40267
Location 2q14.2  [Link to chromosome band 2q14]
Location_base_pair Starts at 119366924 and ends at 119372551 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CBX4 (17q25.3) / DBI (2q14.2)CDK11B (1p36.33) / DBI (2q14.2)DBI (2q14.2) / BCKDHB (6q14.1)
DBI (2q14.2) / CRTC3 (15q26.1)DBI (2q14.2) / UBB (17p11.2)POLR2I (19q13.12) / DBI (2q14.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DBI   2690
Cards
Entrez_Gene (NCBI)DBI  1622  diazepam binding inhibitor, acyl-CoA binding protein
AliasesACBD1; ACBP; CCK-RP; EP
GeneCards (Weizmann)DBI
Ensembl hg19 (Hinxton)ENSG00000155368 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155368 [Gene_View]  chr2:119366924-119372551 [Contig_View]  DBI [Vega]
ICGC DataPortalENSG00000155368
TCGA cBioPortalDBI
AceView (NCBI)DBI
Genatlas (Paris)DBI
WikiGenes1622
SOURCE (Princeton)DBI
Genetics Home Reference (NIH)DBI
Genomic and cartography
GoldenPath hg38 (UCSC)DBI  -     chr2:119366924-119372551 +  2q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DBI  -     2q14.2   [Description]    (hg19-Feb_2009)
EnsemblDBI - 2q14.2 [CytoView hg19]  DBI - 2q14.2 [CytoView hg38]
Mapping of homologs : NCBIDBI [Mapview hg19]  DBI [Mapview hg38]
OMIM125950   
Gene and transcription
Genbank (Entrez)AA096224 AM000001 BC006466 BC062996 BM768076
RefSeq transcript (Entrez)NM_001079862 NM_001079863 NM_001178017 NM_001178041 NM_001178042 NM_001178043 NM_001282633 NM_001282634 NM_001282635 NM_001282636 NM_020548
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DBI
Cluster EST : UnigeneHs.78888 [ NCBI ]
CGAP (NCI)Hs.78888
Alternative Splicing GalleryENSG00000155368
Gene ExpressionDBI [ NCBI-GEO ]   DBI [ EBI - ARRAY_EXPRESS ]   DBI [ SEEK ]   DBI [ MEM ]
Gene Expression Viewer (FireBrowse)DBI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1622
GTEX Portal (Tissue expression)DBI
Protein : pattern, domain, 3D structure
UniProt/SwissProtP07108   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP07108  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP07108
Splice isoforms : SwissVarP07108
PhosPhoSitePlusP07108
Domaine pattern : Prosite (Expaxy)ACB_1 (PS00880)    ACB_2 (PS51228)   
Domains : Interpro (EBI)Acyl-CoA-binding_prot_CS    Acyl-CoA-binding_protein    FERM/acyl-CoA-bd_prot_3-hlx   
Domain families : Pfam (Sanger)ACBP (PF00887)   
Domain families : Pfam (NCBI)pfam00887   
Conserved Domain (NCBI)DBI
DMDM Disease mutations1622
Blocks (Seattle)DBI
PDB (SRS)2CB8    2FJ9   
PDB (PDBSum)2CB8    2FJ9   
PDB (IMB)2CB8    2FJ9   
PDB (RSDB)2CB8    2FJ9   
Structural Biology KnowledgeBase2CB8    2FJ9   
SCOP (Structural Classification of Proteins)2CB8    2FJ9   
CATH (Classification of proteins structures)2CB8    2FJ9   
SuperfamilyP07108
Human Protein AtlasENSG00000155368
Peptide AtlasP07108
HPRD08832
IPIIPI00010182   IPI00218836   IPI00921830   IPI00922055   IPI00965476   IPI00966070   
Protein Interaction databases
DIP (DOE-UCLA)P07108
IntAct (EBI)P07108
FunCoupENSG00000155368
BioGRIDDBI
STRING (EMBL)DBI
ZODIACDBI
Ontologies - Pathways
QuickGOP07108
Ontology : AmiGOendoplasmic reticulum lumen  Golgi apparatus  transport  lipid binding  protein palmitoylation  benzodiazepine receptor binding  long-chain fatty-acyl-CoA biosynthetic process  long-chain fatty acyl-CoA binding  phosphatidylcholine acyl-chain remodeling  protein dimerization activity  extracellular exosome  
Ontology : EGO-EBIendoplasmic reticulum lumen  Golgi apparatus  transport  lipid binding  protein palmitoylation  benzodiazepine receptor binding  long-chain fatty-acyl-CoA biosynthetic process  long-chain fatty acyl-CoA binding  phosphatidylcholine acyl-chain remodeling  protein dimerization activity  extracellular exosome  
Pathways : KEGGPPAR signaling pathway   
NDEx NetworkDBI
Atlas of Cancer Signalling NetworkDBI
Wikipedia pathwaysDBI
Orthology - Evolution
OrthoDB1622
GeneTree (enSembl)ENSG00000155368
Phylogenetic Trees/Animal Genes : TreeFamDBI
HOVERGENP07108
HOGENOMP07108
Homologs : HomoloGeneDBI
Homology/Alignments : Family Browser (UCSC)DBI
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDBI [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DBI
dbVarDBI
ClinVarDBI
1000_GenomesDBI 
Exome Variant ServerDBI
ExAC (Exome Aggregation Consortium)DBI (select the gene name)
Genetic variants : HAPMAP1622
Genomic Variants (DGV)DBI [DGVbeta]
DECIPHERDBI [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDBI 
Mutations
ICGC Data PortalDBI 
TCGA Data PortalDBI 
Broad Tumor PortalDBI
OASIS PortalDBI [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDBI  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDBI
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DBI
DgiDB (Drug Gene Interaction Database)DBI
DoCM (Curated mutations)DBI (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DBI (select a term)
intoGenDBI
Cancer3DDBI(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM125950   
Orphanet
MedgenDBI
Genetic Testing Registry DBI
NextProtP07108 [Medical]
TSGene1622
GENETestsDBI
Target ValidationDBI
Huge Navigator DBI [HugePedia]
snp3D : Map Gene to Disease1622
BioCentury BCIQDBI
ClinGenDBI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1622
Chemical/Pharm GKB GenePA27158
Clinical trialDBI
Miscellaneous
canSAR (ICR)DBI (select the gene name)
Probes
Litterature
PubMed65 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDBI
EVEXDBI
GoPubMedDBI
iHOPDBI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:30:37 CEST 2017

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