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DBP (D-box binding PAR bZIP transcription factor)

Identity

Alias_namesD site of albumin promoter (albumin D-box) binding protein
Alias_symbol (synonym)DABP
Other aliastaxREB302
HGNC (Hugo) DBP
LocusID (NCBI) 1628
Atlas_Id 51295
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 48630560 and ends at 48637550 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DBP   2697
Cards
Entrez_Gene (NCBI)DBP  1628  D-box binding PAR bZIP transcription factor
AliasesDABP; taxREB302
GeneCards (Weizmann)DBP
Ensembl hg19 (Hinxton)ENSG00000105516 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105516 [Gene_View]  ENSG00000105516 [Sequence]  chr19:48630560-48637550 [Contig_View]  DBP [Vega]
ICGC DataPortalENSG00000105516
TCGA cBioPortalDBP
AceView (NCBI)DBP
Genatlas (Paris)DBP
WikiGenes1628
SOURCE (Princeton)DBP
Genetics Home Reference (NIH)DBP
Genomic and cartography
GoldenPath hg38 (UCSC)DBP  -     chr19:48630560-48637550 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DBP  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblDBP - 19q13.33 [CytoView hg19]  DBP - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBIDBP [Mapview hg19]  DBP [Mapview hg38]
OMIM124097   
Gene and transcription
Genbank (Entrez)AB208807 AK310025 BC011965 BT006836 CA425431
RefSeq transcript (Entrez)NM_001352
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DBP
Cluster EST : UnigeneHs.528006 [ NCBI ]
CGAP (NCI)Hs.528006
Alternative Splicing GalleryENSG00000105516
Gene ExpressionDBP [ NCBI-GEO ]   DBP [ EBI - ARRAY_EXPRESS ]   DBP [ SEEK ]   DBP [ MEM ]
Gene Expression Viewer (FireBrowse)DBP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1628
GTEX Portal (Tissue expression)DBP
Human Protein AtlasENSG00000105516-DBP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ10586   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ10586  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ10586
Splice isoforms : SwissVarQ10586
PhosPhoSitePlusQ10586
Domaine pattern : Prosite (Expaxy)BZIP (PS50217)   
Domains : Interpro (EBI)bZIP    DBP   
Domain families : Pfam (Sanger)bZIP_2 (PF07716)   
Domain families : Pfam (NCBI)pfam07716   
Domain families : Smart (EMBL)BRLZ (SM00338)  
Conserved Domain (NCBI)DBP
DMDM Disease mutations1628
Blocks (Seattle)DBP
SuperfamilyQ10586
Human Protein Atlas [tissue]ENSG00000105516-DBP [tissue]
Peptide AtlasQ10586
HPRD00497
IPIIPI00305559   IPI00556150   
Protein Interaction databases
DIP (DOE-UCLA)Q10586
IntAct (EBI)Q10586
FunCoupENSG00000105516
BioGRIDDBP
STRING (EMBL)DBP
ZODIACDBP
Ontologies - Pathways
QuickGOQ10586
Ontology : AmiGORNA polymerase II regulatory region sequence-specific DNA binding  RNA polymerase II regulatory region sequence-specific DNA binding  RNA polymerase II transcription factor activity, sequence-specific DNA binding  RNA polymerase II transcription factor activity, sequence-specific DNA binding  RNA polymerase II transcription factor activity, sequence-specific DNA binding  transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding  transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding  liver development  nucleus  regulation of transcription by RNA polymerase II  transcription by RNA polymerase II  circadian rhythm  positive regulation of transcription by RNA polymerase II  
Ontology : EGO-EBIRNA polymerase II regulatory region sequence-specific DNA binding  RNA polymerase II regulatory region sequence-specific DNA binding  RNA polymerase II transcription factor activity, sequence-specific DNA binding  RNA polymerase II transcription factor activity, sequence-specific DNA binding  RNA polymerase II transcription factor activity, sequence-specific DNA binding  transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding  transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding  liver development  nucleus  regulation of transcription by RNA polymerase II  transcription by RNA polymerase II  circadian rhythm  positive regulation of transcription by RNA polymerase II  
NDEx NetworkDBP
Atlas of Cancer Signalling NetworkDBP
Wikipedia pathwaysDBP
Orthology - Evolution
OrthoDB1628
GeneTree (enSembl)ENSG00000105516
Phylogenetic Trees/Animal Genes : TreeFamDBP
HOVERGENQ10586
HOGENOMQ10586
Homologs : HomoloGeneDBP
Homology/Alignments : Family Browser (UCSC)DBP
Gene fusions - Rearrangements
Fusion : QuiverDBP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDBP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DBP
dbVarDBP
ClinVarDBP
1000_GenomesDBP 
Exome Variant ServerDBP
ExAC (Exome Aggregation Consortium)ENSG00000105516
GNOMAD BrowserENSG00000105516
Varsome BrowserDBP
Genetic variants : HAPMAP1628
Genomic Variants (DGV)DBP [DGVbeta]
DECIPHERDBP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDBP 
Mutations
ICGC Data PortalDBP 
TCGA Data PortalDBP 
Broad Tumor PortalDBP
OASIS PortalDBP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDBP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDBP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DBP
DgiDB (Drug Gene Interaction Database)DBP
DoCM (Curated mutations)DBP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DBP (select a term)
intoGenDBP
Cancer3DDBP(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM124097   
Orphanet
DisGeNETDBP
MedgenDBP
Genetic Testing Registry DBP
NextProtQ10586 [Medical]
TSGene1628
GENETestsDBP
Target ValidationDBP
Huge Navigator DBP [HugePedia]
snp3D : Map Gene to Disease1628
BioCentury BCIQDBP
ClinGenDBP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD1628
Chemical/Pharm GKB GenePA27165
Clinical trialDBP
Miscellaneous
canSAR (ICR)DBP (select the gene name)
Probes
Litterature
PubMed37 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDBP
EVEXDBP
GoPubMedDBP
iHOPDBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 27 11:18:30 CEST 2018

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