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DCAF10 (DDB1 and CUL4 associated factor 10)

Identity

Alias_namesWDR32
WD repeat domain 32
Alias_symbol (synonym)MGC10765
FLJ23201
Other alias
HGNC (Hugo) DCAF10
LocusID (NCBI) 79269
Atlas_Id 62310
Location 9p13.2  [Link to chromosome band 9p13]
Location_base_pair Starts at 37800551 and ends at 37867665 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
DCAF10 (9p13.2) / CENPP (9q22.31)DCAF10 (9p13.2) / DCAF10 (9p13.2)RIC1 (9p24.1) / DCAF10 (9p13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DCAF10   23686
Cards
Entrez_Gene (NCBI)DCAF10  79269  DDB1 and CUL4 associated factor 10
AliasesWDR32
GeneCards (Weizmann)DCAF10
Ensembl hg19 (Hinxton)ENSG00000122741 [Gene_View]  chr9:37800551-37867665 [Contig_View]  DCAF10 [Vega]
Ensembl hg38 (Hinxton)ENSG00000122741 [Gene_View]  chr9:37800551-37867665 [Contig_View]  DCAF10 [Vega]
ICGC DataPortalENSG00000122741
TCGA cBioPortalDCAF10
AceView (NCBI)DCAF10
Genatlas (Paris)DCAF10
WikiGenes79269
SOURCE (Princeton)DCAF10
Genetics Home Reference (NIH)DCAF10
Genomic and cartography
GoldenPath hg19 (UCSC)DCAF10  -     chr9:37800551-37867665 +  9p13.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DCAF10  -     9p13.2   [Description]    (hg38-Dec_2013)
EnsemblDCAF10 - 9p13.2 [CytoView hg19]  DCAF10 - 9p13.2 [CytoView hg38]
Mapping of homologs : NCBIDCAF10 [Mapview hg19]  DCAF10 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK023620 AK026854 AK074532 AK309712 AK315756
RefSeq transcript (Entrez)NM_001286810 NM_024345
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_008413 NW_004929342
Consensus coding sequences : CCDS (NCBI)DCAF10
Cluster EST : UnigeneHs.118394 [ NCBI ]
CGAP (NCI)Hs.118394
Alternative Splicing GalleryENSG00000122741
Gene ExpressionDCAF10 [ NCBI-GEO ]   DCAF10 [ EBI - ARRAY_EXPRESS ]   DCAF10 [ SEEK ]   DCAF10 [ MEM ]
Gene Expression Viewer (FireBrowse)DCAF10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79269
GTEX Portal (Tissue expression)DCAF10
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5QP82   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5QP82  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5QP82
Splice isoforms : SwissVarQ5QP82
PhosPhoSitePlusQ5QP82
Domaine pattern : Prosite (Expaxy)WD_REPEATS_1 (PS00678)    WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_CS    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)DCAF10
DMDM Disease mutations79269
Blocks (Seattle)DCAF10
SuperfamilyQ5QP82
Human Protein AtlasENSG00000122741
Peptide AtlasQ5QP82
HPRD08319
IPIIPI00410264   IPI00013653   
Protein Interaction databases
DIP (DOE-UCLA)Q5QP82
IntAct (EBI)Q5QP82
FunCoupENSG00000122741
BioGRIDDCAF10
STRING (EMBL)DCAF10
ZODIACDCAF10
Ontologies - Pathways
QuickGOQ5QP82
Ontology : AmiGOprotein ubiquitination  protein ubiquitination  Cul4-RING E3 ubiquitin ligase complex  
Ontology : EGO-EBIprotein ubiquitination  protein ubiquitination  Cul4-RING E3 ubiquitin ligase complex  
NDEx NetworkDCAF10
Atlas of Cancer Signalling NetworkDCAF10
Wikipedia pathwaysDCAF10
Orthology - Evolution
OrthoDB79269
GeneTree (enSembl)ENSG00000122741
Phylogenetic Trees/Animal Genes : TreeFamDCAF10
HOVERGENQ5QP82
HOGENOMQ5QP82
Homologs : HomoloGeneDCAF10
Homology/Alignments : Family Browser (UCSC)DCAF10
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDCAF10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DCAF10
dbVarDCAF10
ClinVarDCAF10
1000_GenomesDCAF10 
Exome Variant ServerDCAF10
ExAC (Exome Aggregation Consortium)DCAF10 (select the gene name)
Genetic variants : HAPMAP79269
Genomic Variants (DGV)DCAF10 [DGVbeta]
DECIPHER (Syndromes)9:37800551-37867665  ENSG00000122741
CONAN: Copy Number AnalysisDCAF10 
Mutations
ICGC Data PortalDCAF10 
TCGA Data PortalDCAF10 
Broad Tumor PortalDCAF10
OASIS PortalDCAF10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDCAF10  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDCAF10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DCAF10
DgiDB (Drug Gene Interaction Database)DCAF10
DoCM (Curated mutations)DCAF10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DCAF10 (select a term)
intoGenDCAF10
Cancer3DDCAF10(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDCAF10
Genetic Testing Registry DCAF10
NextProtQ5QP82 [Medical]
TSGene79269
GENETestsDCAF10
Huge Navigator DCAF10 [HugePedia]
snp3D : Map Gene to Disease79269
BioCentury BCIQDCAF10
ClinGenDCAF10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79269
Chemical/Pharm GKB GenePA165585713
Clinical trialDCAF10
Miscellaneous
canSAR (ICR)DCAF10 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDCAF10
EVEXDCAF10
GoPubMedDCAF10
iHOPDCAF10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:04 CET 2017

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