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DCAF11 (DDB1 and CUL4 associated factor 11)

Identity

Alias_namesWDR23
WD repeat domain 23
Alias_symbol (synonym)PRO2389
GL014
Other alias
HGNC (Hugo) DCAF11
LocusID (NCBI) 80344
Atlas_Id 62311
Location 14q12  [Link to chromosome band 14q12]
Location_base_pair Starts at 24114697 and ends at 24125242 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DCAF11   20258
Cards
Entrez_Gene (NCBI)DCAF11  80344  DDB1 and CUL4 associated factor 11
AliasesGL014; PRO2389; WDR23
GeneCards (Weizmann)DCAF11
Ensembl hg19 (Hinxton)ENSG00000100897 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100897 [Gene_View]  chr14:24114697-24125242 [Contig_View]  DCAF11 [Vega]
ICGC DataPortalENSG00000100897
TCGA cBioPortalDCAF11
AceView (NCBI)DCAF11
Genatlas (Paris)DCAF11
WikiGenes80344
SOURCE (Princeton)DCAF11
Genetics Home Reference (NIH)DCAF11
Genomic and cartography
GoldenPath hg38 (UCSC)DCAF11  -     chr14:24114697-24125242 +  14q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DCAF11  -     14q12   [Description]    (hg19-Feb_2009)
EnsemblDCAF11 - 14q12 [CytoView hg19]  DCAF11 - 14q12 [CytoView hg38]
Mapping of homologs : NCBIDCAF11 [Mapview hg19]  DCAF11 [Mapview hg38]
OMIM613317   
Gene and transcription
Genbank (Entrez)AB209073 AF130070 AF267858 AK027223 AK057636
RefSeq transcript (Entrez)NM_001163484 NM_025230 NM_181357
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DCAF11
Cluster EST : UnigeneHs.525251 [ NCBI ]
CGAP (NCI)Hs.525251
Alternative Splicing GalleryENSG00000100897
Gene ExpressionDCAF11 [ NCBI-GEO ]   DCAF11 [ EBI - ARRAY_EXPRESS ]   DCAF11 [ SEEK ]   DCAF11 [ MEM ]
Gene Expression Viewer (FireBrowse)DCAF11 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80344
GTEX Portal (Tissue expression)DCAF11
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TEB1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TEB1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TEB1
Splice isoforms : SwissVarQ8TEB1
PhosPhoSitePlusQ8TEB1
Domaine pattern : Prosite (Expaxy)WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)DCAF11/LEC14B    G-protein_beta_WD-40_rep    WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)DCAF11
DMDM Disease mutations80344
Blocks (Seattle)DCAF11
SuperfamilyQ8TEB1
Human Protein AtlasENSG00000100897
Peptide AtlasQ8TEB1
HPRD18297
IPIIPI00178972   IPI00328589   IPI00328631   IPI00902464   
Protein Interaction databases
DIP (DOE-UCLA)Q8TEB1
IntAct (EBI)Q8TEB1
FunCoupENSG00000100897
BioGRIDDCAF11
STRING (EMBL)DCAF11
ZODIACDCAF11
Ontologies - Pathways
QuickGOQ8TEB1
Ontology : AmiGOprotein binding  nucleoplasm  protein ubiquitination  protein ubiquitination  Cul4-RING E3 ubiquitin ligase complex  
Ontology : EGO-EBIprotein binding  nucleoplasm  protein ubiquitination  protein ubiquitination  Cul4-RING E3 ubiquitin ligase complex  
NDEx NetworkDCAF11
Atlas of Cancer Signalling NetworkDCAF11
Wikipedia pathwaysDCAF11
Orthology - Evolution
OrthoDB80344
GeneTree (enSembl)ENSG00000100897
Phylogenetic Trees/Animal Genes : TreeFamDCAF11
HOVERGENQ8TEB1
HOGENOMQ8TEB1
Homologs : HomoloGeneDCAF11
Homology/Alignments : Family Browser (UCSC)DCAF11
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDCAF11 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DCAF11
dbVarDCAF11
ClinVarDCAF11
1000_GenomesDCAF11 
Exome Variant ServerDCAF11
ExAC (Exome Aggregation Consortium)DCAF11 (select the gene name)
Genetic variants : HAPMAP80344
Genomic Variants (DGV)DCAF11 [DGVbeta]
DECIPHERDCAF11 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDCAF11 
Mutations
ICGC Data PortalDCAF11 
TCGA Data PortalDCAF11 
Broad Tumor PortalDCAF11
OASIS PortalDCAF11 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDDCAF11
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DCAF11
DgiDB (Drug Gene Interaction Database)DCAF11
DoCM (Curated mutations)DCAF11 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DCAF11 (select a term)
intoGenDCAF11
Cancer3DDCAF11(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613317   
Orphanet
MedgenDCAF11
Genetic Testing Registry DCAF11
NextProtQ8TEB1 [Medical]
TSGene80344
GENETestsDCAF11
Target ValidationDCAF11
Huge Navigator DCAF11 [HugePedia]
snp3D : Map Gene to Disease80344
BioCentury BCIQDCAF11
ClinGenDCAF11
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80344
Chemical/Pharm GKB GenePA165478701
Clinical trialDCAF11
Miscellaneous
canSAR (ICR)DCAF11 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDCAF11
EVEXDCAF11
GoPubMedDCAF11
iHOPDCAF11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:05:52 CEST 2017

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