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DCAF12 (DDB1 and CUL4 associated factor 12)

Identity

Alias (NCBI)CT102
KIAA1892
TCC52
WDR40A
HGNC (Hugo) DCAF12
HGNC Alias symbDKFZP434O125
MGC1058
CT102
TCC52
HGNC Alias namecancer/testis antigen 102
HGNC Previous nameKIAA1892
 WDR40A
HGNC Previous nameKIAA1892
 WD repeat domain 40A
LocusID (NCBI) 25853
Atlas_Id 53342
Location 9p13.3  [Link to chromosome band 9p13]
Location_base_pair Starts at 34086387 and ends at 34126698 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DCAF12 (9p13.3) / CNBD1 (8q21.3)UBAP2 (9p13.3) / DCAF12 (9p13.3)DCAF12 9p13.3 / CNBD1 8q21.3
UBAP2 9p13.3 / DCAF12 9p13.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(9;9)(p13;p13) UBAP1/DCAF12


External links

Nomenclature
HGNC (Hugo)DCAF12   19911
Cards
Entrez_Gene (NCBI)DCAF12    DDB1 and CUL4 associated factor 12
AliasesCT102; KIAA1892; TCC52; WDR40A
GeneCards (Weizmann)DCAF12
Ensembl hg19 (Hinxton)ENSG00000198876 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000198876 [Gene_View]  ENSG00000198876 [Sequence]  chr9:34086387-34126698 [Contig_View]  DCAF12 [Vega]
ICGC DataPortalENSG00000198876
TCGA cBioPortalDCAF12
AceView (NCBI)DCAF12
Genatlas (Paris)DCAF12
SOURCE (Princeton)DCAF12
Genetics Home Reference (NIH)DCAF12
Genomic and cartography
GoldenPath hg38 (UCSC)DCAF12  -     chr9:34086387-34126698 -  9p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DCAF12  -     9p13.3   [Description]    (hg19-Feb_2009)
GoldenPathDCAF12 - 9p13.3 [CytoView hg19]  DCAF12 - 9p13.3 [CytoView hg38]
ImmunoBaseENSG00000198876
Genome Data Viewer NCBIDCAF12 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB067479 AF085907 AF131771 AI140359 AK000354
RefSeq transcript (Entrez)NM_015397
Consensus coding sequences : CCDS (NCBI)DCAF12
Gene ExpressionDCAF12 [ NCBI-GEO ]   DCAF12 [ EBI - ARRAY_EXPRESS ]   DCAF12 [ SEEK ]   DCAF12 [ MEM ]
Gene Expression Viewer (FireBrowse)DCAF12 [ Firebrowse - Broad ]
GenevisibleExpression of DCAF12 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)25853
GTEX Portal (Tissue expression)DCAF12
Human Protein AtlasENSG00000198876-DCAF12 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DCAF12
Human Protein Atlas [tissue]ENSG00000198876-DCAF12 [tissue]
HPRD10031
Protein Interaction databases
BioGRIDDCAF12
STRING (EMBL)DCAF12
ZODIACDCAF12
Ontologies - Pathways
Litterature
PubMed23 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDCAF12
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:06:10 CEST 2021

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