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DCAF8L1 (DDB1 and CUL4 associated factor 8-like 1)

Identity

Alias_namesWDR42B
WD repeat domain 42B
Other alias
HGNC (Hugo) DCAF8L1
LocusID (NCBI) 139425
Atlas_Id 62321
Location Xp21.3  [Link to chromosome band Xp21]
Location_base_pair Starts at 27996110 and ends at 27999566 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DCAF8L1   31810
Cards
Entrez_Gene (NCBI)DCAF8L1  139425  DDB1 and CUL4 associated factor 8-like 1
AliasesWDR42B
GeneCards (Weizmann)DCAF8L1
Ensembl hg19 (Hinxton)ENSG00000226372 [Gene_View]  chrX:27996110-27999566 [Contig_View]  DCAF8L1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000226372 [Gene_View]  chrX:27996110-27999566 [Contig_View]  DCAF8L1 [Vega]
ICGC DataPortalENSG00000226372
TCGA cBioPortalDCAF8L1
AceView (NCBI)DCAF8L1
Genatlas (Paris)DCAF8L1
WikiGenes139425
SOURCE (Princeton)DCAF8L1
Genetics Home Reference (NIH)DCAF8L1
Genomic and cartography
GoldenPath hg19 (UCSC)DCAF8L1  -     chrX:27996110-27999566 -  Xp21.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DCAF8L1  -     Xp21.3   [Description]    (hg38-Dec_2013)
EnsemblDCAF8L1 - Xp21.3 [CytoView hg19]  DCAF8L1 - Xp21.3 [CytoView hg38]
Mapping of homologs : NCBIDCAF8L1 [Mapview hg19]  DCAF8L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128123
RefSeq transcript (Entrez)NM_001017930
RefSeq genomic (Entrez)NC_000023 NC_018934 NG_021357 NT_167197 NW_004929438
Consensus coding sequences : CCDS (NCBI)DCAF8L1
Cluster EST : UnigeneHs.447365 [ NCBI ]
CGAP (NCI)Hs.447365
Alternative Splicing GalleryENSG00000226372
Gene ExpressionDCAF8L1 [ NCBI-GEO ]   DCAF8L1 [ EBI - ARRAY_EXPRESS ]   DCAF8L1 [ SEEK ]   DCAF8L1 [ MEM ]
Gene Expression Viewer (FireBrowse)DCAF8L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)139425
GTEX Portal (Tissue expression)DCAF8L1
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NGE4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NGE4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NGE4
Splice isoforms : SwissVarA6NGE4
PhosPhoSitePlusA6NGE4
Domaine pattern : Prosite (Expaxy)WD_REPEATS_2 (PS50082)    WD_REPEATS_REGION (PS50294)   
Domains : Interpro (EBI)WD40/YVTN_repeat-like_dom    WD40_repeat    WD40_repeat_dom   
Domain families : Pfam (Sanger)WD40 (PF00400)   
Domain families : Pfam (NCBI)pfam00400   
Domain families : Smart (EMBL)WD40 (SM00320)  
Conserved Domain (NCBI)DCAF8L1
DMDM Disease mutations139425
Blocks (Seattle)DCAF8L1
SuperfamilyA6NGE4
Human Protein AtlasENSG00000226372
Peptide AtlasA6NGE4
HPRD18551
IPIIPI00046804   
Protein Interaction databases
DIP (DOE-UCLA)A6NGE4
IntAct (EBI)A6NGE4
FunCoupENSG00000226372
BioGRIDDCAF8L1
STRING (EMBL)DCAF8L1
ZODIACDCAF8L1
Ontologies - Pathways
QuickGOA6NGE4
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkDCAF8L1
Atlas of Cancer Signalling NetworkDCAF8L1
Wikipedia pathwaysDCAF8L1
Orthology - Evolution
OrthoDB139425
GeneTree (enSembl)ENSG00000226372
Phylogenetic Trees/Animal Genes : TreeFamDCAF8L1
HOVERGENA6NGE4
HOGENOMA6NGE4
Homologs : HomoloGeneDCAF8L1
Homology/Alignments : Family Browser (UCSC)DCAF8L1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDCAF8L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DCAF8L1
dbVarDCAF8L1
ClinVarDCAF8L1
1000_GenomesDCAF8L1 
Exome Variant ServerDCAF8L1
ExAC (Exome Aggregation Consortium)DCAF8L1 (select the gene name)
Genetic variants : HAPMAP139425
Genomic Variants (DGV)DCAF8L1 [DGVbeta]
DECIPHER (Syndromes)X:27996110-27999566  ENSG00000226372
CONAN: Copy Number AnalysisDCAF8L1 
Mutations
ICGC Data PortalDCAF8L1 
TCGA Data PortalDCAF8L1 
Broad Tumor PortalDCAF8L1
OASIS PortalDCAF8L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDCAF8L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDCAF8L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)X-chromosome gene database
BioMutasearch DCAF8L1
DgiDB (Drug Gene Interaction Database)DCAF8L1
DoCM (Curated mutations)DCAF8L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DCAF8L1 (select a term)
intoGenDCAF8L1
Cancer3DDCAF8L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDCAF8L1
Genetic Testing Registry DCAF8L1
NextProtA6NGE4 [Medical]
TSGene139425
GENETestsDCAF8L1
Huge Navigator DCAF8L1 [HugePedia]
snp3D : Map Gene to Disease139425
BioCentury BCIQDCAF8L1
ClinGenDCAF8L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD139425
Chemical/Pharm GKB GenePA165756552
Clinical trialDCAF8L1
Miscellaneous
canSAR (ICR)DCAF8L1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDCAF8L1
EVEXDCAF8L1
GoPubMedDCAF8L1
iHOPDCAF8L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:06 CET 2017

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