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DCLRE1C (DNA cross-link repair 1C)

Identity

Alias (NCBI)A-SCID
DCLREC1C
RS-SCID
SCIDA
SNM1C
HGNC (Hugo) DCLRE1C
HGNC Alias symbARTEMIS
FLJ11360
SNM1C
A-SCID
HGNC Alias namePSO2 homolog (S. cerevisiae)
HGNC Previous nameSCIDA
HGNC Previous namesevere combined immunodeficiency, type a (Athabascan)
 DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae)
LocusID (NCBI) 64421
Atlas_Id 40273
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 14904613 and ends at 14954096 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DCLRE1C (10p13) / DCLRE1C (10p13)DNAJC1 (10p12.31) / DCLRE1C (10p13)NSMCE2 (8q24.13) / DCLRE1C (10p13)
DNAJC1 10p12.31 / DCLRE1C 10p13NSMCE2 8q24.13 / DCLRE1C 10p13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(10;10)(p12;q21) CTNNA3/ARHGAP21


External links

Nomenclature
HGNC (Hugo)DCLRE1C   17642
LRG (Locus Reference Genomic)LRG_54
Cards
Entrez_Gene (NCBI)DCLRE1C    DNA cross-link repair 1C
AliasesA-SCID; DCLREC1C; RS-SCID; SCIDA; 
SNM1C
GeneCards (Weizmann)DCLRE1C
Ensembl hg19 (Hinxton)ENSG00000152457 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152457 [Gene_View]  ENSG00000152457 [Sequence]  chr10:14904613-14954096 [Contig_View]  DCLRE1C [Vega]
ICGC DataPortalENSG00000152457
TCGA cBioPortalDCLRE1C
AceView (NCBI)DCLRE1C
Genatlas (Paris)DCLRE1C
SOURCE (Princeton)DCLRE1C
Genetics Home Reference (NIH)DCLRE1C
Genomic and cartography
GoldenPath hg38 (UCSC)DCLRE1C  -     chr10:14904613-14954096 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DCLRE1C  -     10p13   [Description]    (hg19-Feb_2009)
GoldenPathDCLRE1C - 10p13 [CytoView hg19]  DCLRE1C - 10p13 [CytoView hg38]
ImmunoBaseENSG00000152457
Genome Data Viewer NCBIDCLRE1C [Mapview hg19]  
OMIM602450   603554   605988   
Gene and transcription
Genbank (Entrez)AF088055 AF395747 AF395748 AF395749 AF395750
RefSeq transcript (Entrez)NM_001033855 NM_001033857 NM_001033858 NM_001289076 NM_001289077 NM_001289078 NM_001289079 NM_001350965 NM_001350966 NM_001350967 NM_022487
Consensus coding sequences : CCDS (NCBI)DCLRE1C
Gene ExpressionDCLRE1C [ NCBI-GEO ]   DCLRE1C [ EBI - ARRAY_EXPRESS ]   DCLRE1C [ SEEK ]   DCLRE1C [ MEM ]
Gene Expression Viewer (FireBrowse)DCLRE1C [ Firebrowse - Broad ]
GenevisibleExpression of DCLRE1C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64421
GTEX Portal (Tissue expression)DCLRE1C
Human Protein AtlasENSG00000152457-DCLRE1C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DCLRE1C
Human Protein Atlas [tissue]ENSG00000152457-DCLRE1C [tissue]
HPRD05817
Protein Interaction databases
BioGRIDDCLRE1C
STRING (EMBL)DCLRE1C
ZODIACDCLRE1C
Ontologies - Pathways
Litterature
PubMed92 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDCLRE1C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:06:14 CEST 2021

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