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DCST2 (DC-STAMP domain containing 2)

Identity

Alias_symbol (synonym)FLJ32934
Other alias-
HGNC (Hugo) DCST2
LocusID (NCBI) 127579
Atlas_Id 56199
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 155018527 and ends at 155033781 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
KCNN3 (1q21.3) / DCST2 (1q21.3)THEM4 (1q21.3) / DCST2 (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DCST2   26562
Cards
Entrez_Gene (NCBI)DCST2  127579  DC-STAMP domain containing 2
Aliases
GeneCards (Weizmann)DCST2
Ensembl hg19 (Hinxton)ENSG00000163354 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000163354 [Gene_View]  chr1:155018527-155033781 [Contig_View]  DCST2 [Vega]
ICGC DataPortalENSG00000163354
TCGA cBioPortalDCST2
AceView (NCBI)DCST2
Genatlas (Paris)DCST2
WikiGenes127579
SOURCE (Princeton)DCST2
Genetics Home Reference (NIH)DCST2
Genomic and cartography
GoldenPath hg38 (UCSC)DCST2  -     chr1:155018527-155033781 -  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DCST2  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblDCST2 - 1q21.3 [CytoView hg19]  DCST2 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIDCST2 [Mapview hg19]  DCST2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA401747 AK057496 AK097468 AK097993 BC111794
RefSeq transcript (Entrez)NM_144622
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DCST2
Cluster EST : UnigeneHs.591491 [ NCBI ]
CGAP (NCI)Hs.591491
Alternative Splicing GalleryENSG00000163354
Gene ExpressionDCST2 [ NCBI-GEO ]   DCST2 [ EBI - ARRAY_EXPRESS ]   DCST2 [ SEEK ]   DCST2 [ MEM ]
Gene Expression Viewer (FireBrowse)DCST2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)127579
GTEX Portal (Tissue expression)DCST2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T1A1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T1A1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T1A1
Splice isoforms : SwissVarQ5T1A1
PhosPhoSitePlusQ5T1A1
Domains : Interpro (EBI)DC_STAMP-like   
Domain families : Pfam (Sanger)DC_STAMP (PF07782)   
Domain families : Pfam (NCBI)pfam07782   
Conserved Domain (NCBI)DCST2
DMDM Disease mutations127579
Blocks (Seattle)DCST2
SuperfamilyQ5T1A1
Human Protein AtlasENSG00000163354
Peptide AtlasQ5T1A1
HPRD08739
IPIIPI00479468   IPI00383888   IPI00984460   
Protein Interaction databases
DIP (DOE-UCLA)Q5T1A1
IntAct (EBI)Q5T1A1
FunCoupENSG00000163354
BioGRIDDCST2
STRING (EMBL)DCST2
ZODIACDCST2
Ontologies - Pathways
QuickGOQ5T1A1
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkDCST2
Atlas of Cancer Signalling NetworkDCST2
Wikipedia pathwaysDCST2
Orthology - Evolution
OrthoDB127579
GeneTree (enSembl)ENSG00000163354
Phylogenetic Trees/Animal Genes : TreeFamDCST2
HOVERGENQ5T1A1
HOGENOMQ5T1A1
Homologs : HomoloGeneDCST2
Homology/Alignments : Family Browser (UCSC)DCST2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDCST2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DCST2
dbVarDCST2
ClinVarDCST2
1000_GenomesDCST2 
Exome Variant ServerDCST2
ExAC (Exome Aggregation Consortium)DCST2 (select the gene name)
Genetic variants : HAPMAP127579
Genomic Variants (DGV)DCST2 [DGVbeta]
DECIPHERDCST2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDCST2 
Mutations
ICGC Data PortalDCST2 
TCGA Data PortalDCST2 
Broad Tumor PortalDCST2
OASIS PortalDCST2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDCST2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDCST2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DCST2
DgiDB (Drug Gene Interaction Database)DCST2
DoCM (Curated mutations)DCST2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DCST2 (select a term)
intoGenDCST2
Cancer3DDCST2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDCST2
Genetic Testing Registry DCST2
NextProtQ5T1A1 [Medical]
TSGene127579
GENETestsDCST2
Target ValidationDCST2
Huge Navigator DCST2 [HugePedia]
snp3D : Map Gene to Disease127579
BioCentury BCIQDCST2
ClinGenDCST2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD127579
Chemical/Pharm GKB GenePA142672006
Clinical trialDCST2
Miscellaneous
canSAR (ICR)DCST2 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDCST2
EVEXDCST2
GoPubMedDCST2
iHOPDCST2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:04:53 CEST 2017

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