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DCTPP1 (dCTP pyrophosphatase 1)

Identity

Alias_symbol (synonym)MGC5627
RS21C6
CDA03
XTP3TPA
Other alias
HGNC (Hugo) DCTPP1
LocusID (NCBI) 79077
Atlas_Id 62341
Location 16p11.2  [Link to chromosome band 16p11]
Location_base_pair Starts at 30423698 and ends at 30430052 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DCTPP1   28777
Cards
Entrez_Gene (NCBI)DCTPP1  79077  dCTP pyrophosphatase 1
AliasesCDA03; RS21C6; XTP3TPA
GeneCards (Weizmann)DCTPP1
Ensembl hg19 (Hinxton)ENSG00000179958 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000179958 [Gene_View]  chr16:30423698-30430052 [Contig_View]  DCTPP1 [Vega]
ICGC DataPortalENSG00000179958
TCGA cBioPortalDCTPP1
AceView (NCBI)DCTPP1
Genatlas (Paris)DCTPP1
WikiGenes79077
SOURCE (Princeton)DCTPP1
Genetics Home Reference (NIH)DCTPP1
Genomic and cartography
GoldenPath hg38 (UCSC)DCTPP1  -     chr16:30423698-30430052 -  16p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DCTPP1  -     16p11.2   [Description]    (hg19-Feb_2009)
EnsemblDCTPP1 - 16p11.2 [CytoView hg19]  DCTPP1 - 16p11.2 [CytoView hg38]
Mapping of homologs : NCBIDCTPP1 [Mapview hg19]  DCTPP1 [Mapview hg38]
OMIM615840   
Gene and transcription
Genbank (Entrez)AF210430 AF212242 AK024843 AY453409 BC001344
RefSeq transcript (Entrez)NM_024096
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DCTPP1
Cluster EST : UnigeneHs.632191 [ NCBI ]
CGAP (NCI)Hs.632191
Alternative Splicing GalleryENSG00000179958
Gene ExpressionDCTPP1 [ NCBI-GEO ]   DCTPP1 [ EBI - ARRAY_EXPRESS ]   DCTPP1 [ SEEK ]   DCTPP1 [ MEM ]
Gene Expression Viewer (FireBrowse)DCTPP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79077
GTEX Portal (Tissue expression)DCTPP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H773   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H773  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H773
Splice isoforms : SwissVarQ9H773
Catalytic activity : Enzyme3.6.1.12 [ Enzyme-Expasy ]   3.6.1.123.6.1.12 [ IntEnz-EBI ]   3.6.1.12 [ BRENDA ]   3.6.1.12 [ KEGG ]   
PhosPhoSitePlusQ9H773
Domaine pattern : Prosite (Expaxy)EAR (PS50912)   
Domains : Interpro (EBI)DCTPP    EAR   
Domain families : Pfam (Sanger)MazG-like (PF12643)   
Domain families : Pfam (NCBI)pfam12643   
Conserved Domain (NCBI)DCTPP1
DMDM Disease mutations79077
Blocks (Seattle)DCTPP1
SuperfamilyQ9H773
Human Protein AtlasENSG00000179958
Peptide AtlasQ9H773
HPRD18310
IPIIPI00012197   
Protein Interaction databases
DIP (DOE-UCLA)Q9H773
IntAct (EBI)Q9H773
FunCoupENSG00000179958
BioGRIDDCTPP1
STRING (EMBL)DCTPP1
ZODIACDCTPP1
Ontologies - Pathways
QuickGOQ9H773
Ontology : AmiGOmagnesium ion binding  protein binding  nucleus  mitochondrion  cytosol  cytosol  dCTP catabolic process  nucleoside triphosphate catabolic process  nucleoside triphosphate catabolic process  pyrimidine deoxyribonucleotide binding  DNA protection  identical protein binding  dTTP catabolic process  nucleoside-triphosphate diphosphatase activity  nucleoside-triphosphate diphosphatase activity  dCTP diphosphatase activity  protein homotetramerization  
Ontology : EGO-EBImagnesium ion binding  protein binding  nucleus  mitochondrion  cytosol  cytosol  dCTP catabolic process  nucleoside triphosphate catabolic process  nucleoside triphosphate catabolic process  pyrimidine deoxyribonucleotide binding  DNA protection  identical protein binding  dTTP catabolic process  nucleoside-triphosphate diphosphatase activity  nucleoside-triphosphate diphosphatase activity  dCTP diphosphatase activity  protein homotetramerization  
Pathways : KEGGPyrimidine metabolism   
NDEx NetworkDCTPP1
Atlas of Cancer Signalling NetworkDCTPP1
Wikipedia pathwaysDCTPP1
Orthology - Evolution
OrthoDB79077
GeneTree (enSembl)ENSG00000179958
Phylogenetic Trees/Animal Genes : TreeFamDCTPP1
HOVERGENQ9H773
HOGENOMQ9H773
Homologs : HomoloGeneDCTPP1
Homology/Alignments : Family Browser (UCSC)DCTPP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDCTPP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DCTPP1
dbVarDCTPP1
ClinVarDCTPP1
1000_GenomesDCTPP1 
Exome Variant ServerDCTPP1
ExAC (Exome Aggregation Consortium)DCTPP1 (select the gene name)
Genetic variants : HAPMAP79077
Genomic Variants (DGV)DCTPP1 [DGVbeta]
DECIPHERDCTPP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDCTPP1 
Mutations
ICGC Data PortalDCTPP1 
TCGA Data PortalDCTPP1 
Broad Tumor PortalDCTPP1
OASIS PortalDCTPP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDCTPP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDCTPP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DCTPP1
DgiDB (Drug Gene Interaction Database)DCTPP1
DoCM (Curated mutations)DCTPP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DCTPP1 (select a term)
intoGenDCTPP1
Cancer3DDCTPP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615840   
Orphanet
MedgenDCTPP1
Genetic Testing Registry DCTPP1
NextProtQ9H773 [Medical]
TSGene79077
GENETestsDCTPP1
Target ValidationDCTPP1
Huge Navigator DCTPP1 [HugePedia]
snp3D : Map Gene to Disease79077
BioCentury BCIQDCTPP1
ClinGenDCTPP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79077
Chemical/Pharm GKB GenePA164718733
Clinical trialDCTPP1
Miscellaneous
canSAR (ICR)DCTPP1 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDCTPP1
EVEXDCTPP1
GoPubMedDCTPP1
iHOPDCTPP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:24 CEST 2017

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