Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DCUN1D5 (defective in cullin neddylation 1 domain containing 5)

Identity

Alias_namesDCN1
Alias_symbol (synonym)MGC2714
FLJ32431
Other aliasSCCRO5
HGNC (Hugo) DCUN1D5
LocusID (NCBI) 84259
Atlas_Id 53255
Location 11q22.3  [Link to chromosome band 11q22]
Location_base_pair Starts at 103050684 and ends at 103092215 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DCUN1D5   28409
Cards
Entrez_Gene (NCBI)DCUN1D5  84259  defective in cullin neddylation 1 domain containing 5
AliasesSCCRO5
GeneCards (Weizmann)DCUN1D5
Ensembl hg19 (Hinxton)ENSG00000137692 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000137692 [Gene_View]  chr11:103050684-103092215 [Contig_View]  DCUN1D5 [Vega]
ICGC DataPortalENSG00000137692
TCGA cBioPortalDCUN1D5
AceView (NCBI)DCUN1D5
Genatlas (Paris)DCUN1D5
WikiGenes84259
SOURCE (Princeton)DCUN1D5
Genetics Home Reference (NIH)DCUN1D5
Genomic and cartography
GoldenPath hg38 (UCSC)DCUN1D5  -     chr11:103050684-103092215 -  11q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DCUN1D5  -     11q22.3   [Description]    (hg19-Feb_2009)
EnsemblDCUN1D5 - 11q22.3 [CytoView hg19]  DCUN1D5 - 11q22.3 [CytoView hg38]
Mapping of homologs : NCBIDCUN1D5 [Mapview hg19]  DCUN1D5 [Mapview hg38]
OMIM616522   
Gene and transcription
Genbank (Entrez)AK056993 AK094744 AK298227 AY364246 BC004169
RefSeq transcript (Entrez)NM_001318739 NM_001318740 NM_001318741 NM_032299
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DCUN1D5
Cluster EST : UnigeneHs.503716 [ NCBI ]
CGAP (NCI)Hs.503716
Alternative Splicing GalleryENSG00000137692
Gene ExpressionDCUN1D5 [ NCBI-GEO ]   DCUN1D5 [ EBI - ARRAY_EXPRESS ]   DCUN1D5 [ SEEK ]   DCUN1D5 [ MEM ]
Gene Expression Viewer (FireBrowse)DCUN1D5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84259
GTEX Portal (Tissue expression)DCUN1D5
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BTE7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BTE7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BTE7
Splice isoforms : SwissVarQ9BTE7
PhosPhoSitePlusQ9BTE7
Domaine pattern : Prosite (Expaxy)DCUN1 (PS51229)   
Domains : Interpro (EBI)DCN-prot    PONY_dom   
Domain families : Pfam (Sanger)Cullin_binding (PF03556)   
Domain families : Pfam (NCBI)pfam03556   
Conserved Domain (NCBI)DCUN1D5
DMDM Disease mutations84259
Blocks (Seattle)DCUN1D5
SuperfamilyQ9BTE7
Human Protein AtlasENSG00000137692
Peptide AtlasQ9BTE7
HPRD14520
IPIIPI00165361   IPI00983531   IPI00977085   IPI00980632   IPI00975727   IPI00984209   IPI00975781   IPI00985500   IPI00977772   
Protein Interaction databases
DIP (DOE-UCLA)Q9BTE7
IntAct (EBI)Q9BTE7
FunCoupENSG00000137692
BioGRIDDCUN1D5
STRING (EMBL)DCUN1D5
ZODIACDCUN1D5
Ontologies - Pathways
QuickGOQ9BTE7
Ontology : AmiGOubiquitin ligase complex  molecular_function  protein binding  cellular_component  biological_process  ubiquitin conjugating enzyme binding  ubiquitin-like protein binding  protein neddylation  positive regulation of ubiquitin-protein transferase activity  cullin family protein binding  
Ontology : EGO-EBIubiquitin ligase complex  molecular_function  protein binding  cellular_component  biological_process  ubiquitin conjugating enzyme binding  ubiquitin-like protein binding  protein neddylation  positive regulation of ubiquitin-protein transferase activity  cullin family protein binding  
NDEx NetworkDCUN1D5
Atlas of Cancer Signalling NetworkDCUN1D5
Wikipedia pathwaysDCUN1D5
Orthology - Evolution
OrthoDB84259
GeneTree (enSembl)ENSG00000137692
Phylogenetic Trees/Animal Genes : TreeFamDCUN1D5
HOVERGENQ9BTE7
HOGENOMQ9BTE7
Homologs : HomoloGeneDCUN1D5
Homology/Alignments : Family Browser (UCSC)DCUN1D5
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDCUN1D5 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DCUN1D5
dbVarDCUN1D5
ClinVarDCUN1D5
1000_GenomesDCUN1D5 
Exome Variant ServerDCUN1D5
ExAC (Exome Aggregation Consortium)DCUN1D5 (select the gene name)
Genetic variants : HAPMAP84259
Genomic Variants (DGV)DCUN1D5 [DGVbeta]
DECIPHERDCUN1D5 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDCUN1D5 
Mutations
ICGC Data PortalDCUN1D5 
TCGA Data PortalDCUN1D5 
Broad Tumor PortalDCUN1D5
OASIS PortalDCUN1D5 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDCUN1D5  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDCUN1D5
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DCUN1D5
DgiDB (Drug Gene Interaction Database)DCUN1D5
DoCM (Curated mutations)DCUN1D5 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DCUN1D5 (select a term)
intoGenDCUN1D5
Cancer3DDCUN1D5(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616522   
Orphanet
MedgenDCUN1D5
Genetic Testing Registry DCUN1D5
NextProtQ9BTE7 [Medical]
TSGene84259
GENETestsDCUN1D5
Target ValidationDCUN1D5
Huge Navigator DCUN1D5 [HugePedia]
snp3D : Map Gene to Disease84259
BioCentury BCIQDCUN1D5
ClinGenDCUN1D5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84259
Chemical/Pharm GKB GenePA142672011
Clinical trialDCUN1D5
Miscellaneous
canSAR (ICR)DCUN1D5 (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDCUN1D5
EVEXDCUN1D5
GoPubMedDCUN1D5
iHOPDCUN1D5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:30:46 CEST 2017

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