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DDI1 (DNA-damage inducible 1 homolog 1 (S. cerevisiae))

Identity

Alias_namesDDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)
DNA-damage inducible 1 homolog 1 (S. cerevisiae)
DNA-damage inducible 1 homolog 1
Alias_symbol (synonym)FLJ36017
Other alias-
HGNC (Hugo) DDI1
LocusID (NCBI) 414301
Atlas_Id 62349
Location 11q22.3  [Link to chromosome band 11q22]
Location_base_pair Starts at 103907308 and ends at 103909922 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DDI1   18961
Cards
Entrez_Gene (NCBI)DDI1  414301  DNA-damage inducible 1 homolog 1 (S. cerevisiae)
Aliases
GeneCards (Weizmann)DDI1
Ensembl hg19 (Hinxton)ENSG00000170967 [Gene_View]  chr11:103907308-103909922 [Contig_View]  DDI1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000170967 [Gene_View]  chr11:103907308-103909922 [Contig_View]  DDI1 [Vega]
ICGC DataPortalENSG00000170967
TCGA cBioPortalDDI1
AceView (NCBI)DDI1
Genatlas (Paris)DDI1
WikiGenes414301
SOURCE (Princeton)DDI1
Genetics Home Reference (NIH)DDI1
Genomic and cartography
GoldenPath hg19 (UCSC)DDI1  -     chr11:103907308-103909922 +  11q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)DDI1  -     11q22.3   [Description]    (hg38-Dec_2013)
EnsemblDDI1 - 11q22.3 [CytoView hg19]  DDI1 - 11q22.3 [CytoView hg38]
Mapping of homologs : NCBIDDI1 [Mapview hg19]  DDI1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF429971 AK093336 BC021172 BC021710 BC022017
RefSeq transcript (Entrez)NM_001001711
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)DDI1
Cluster EST : UnigeneHs.591941 [ NCBI ]
CGAP (NCI)Hs.591941
Alternative Splicing GalleryENSG00000170967
Gene ExpressionDDI1 [ NCBI-GEO ]   DDI1 [ EBI - ARRAY_EXPRESS ]   DDI1 [ SEEK ]   DDI1 [ MEM ]
Gene Expression Viewer (FireBrowse)DDI1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)414301
GTEX Portal (Tissue expression)DDI1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8WTU0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8WTU0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8WTU0
Splice isoforms : SwissVarQ8WTU0
PhosPhoSitePlusQ8WTU0
Domaine pattern : Prosite (Expaxy)UBIQUITIN_2 (PS50053)   
Domains : Interpro (EBI)Peptidase_aspartic_DDI1-type    Peptidase_aspartic_dom    Ubiquitin-like    Ubiquitin-rel_dom   
Domain families : Pfam (Sanger)Asp_protease (PF09668)    ubiquitin (PF00240)   
Domain families : Pfam (NCBI)pfam09668    pfam00240   
Domain families : Smart (EMBL)UBQ (SM00213)  
Conserved Domain (NCBI)DDI1
DMDM Disease mutations414301
Blocks (Seattle)DDI1
PDB (SRS)3S8I   
PDB (PDBSum)3S8I   
PDB (IMB)3S8I   
PDB (RSDB)3S8I   
Structural Biology KnowledgeBase3S8I   
SCOP (Structural Classification of Proteins)3S8I   
CATH (Classification of proteins structures)3S8I   
SuperfamilyQ8WTU0
Human Protein AtlasENSG00000170967
Peptide AtlasQ8WTU0
HPRD13128
IPIIPI00470620   
Protein Interaction databases
DIP (DOE-UCLA)Q8WTU0
IntAct (EBI)Q8WTU0
FunCoupENSG00000170967
BioGRIDDDI1
STRING (EMBL)DDI1
ZODIACDDI1
Ontologies - Pathways
QuickGOQ8WTU0
Ontology : AmiGOaspartic-type endopeptidase activity  protein binding  proteolysis  
Ontology : EGO-EBIaspartic-type endopeptidase activity  protein binding  proteolysis  
NDEx NetworkDDI1
Atlas of Cancer Signalling NetworkDDI1
Wikipedia pathwaysDDI1
Orthology - Evolution
OrthoDB414301
GeneTree (enSembl)ENSG00000170967
Phylogenetic Trees/Animal Genes : TreeFamDDI1
HOVERGENQ8WTU0
HOGENOMQ8WTU0
Homologs : HomoloGeneDDI1
Homology/Alignments : Family Browser (UCSC)DDI1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDDI1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DDI1
dbVarDDI1
ClinVarDDI1
1000_GenomesDDI1 
Exome Variant ServerDDI1
ExAC (Exome Aggregation Consortium)DDI1 (select the gene name)
Genetic variants : HAPMAP414301
Genomic Variants (DGV)DDI1 [DGVbeta]
DECIPHER (Syndromes)11:103907308-103909922  ENSG00000170967
CONAN: Copy Number AnalysisDDI1 
Mutations
ICGC Data PortalDDI1 
TCGA Data PortalDDI1 
Broad Tumor PortalDDI1
OASIS PortalDDI1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDDI1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDDI1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DDI1
DgiDB (Drug Gene Interaction Database)DDI1
DoCM (Curated mutations)DDI1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DDI1 (select a term)
intoGenDDI1
Cancer3DDDI1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDDI1
Genetic Testing Registry DDI1
NextProtQ8WTU0 [Medical]
TSGene414301
GENETestsDDI1
Huge Navigator DDI1 [HugePedia]
snp3D : Map Gene to Disease414301
BioCentury BCIQDDI1
ClinGenDDI1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414301
Chemical/Pharm GKB GenePA142672003
Clinical trialDDI1
Miscellaneous
canSAR (ICR)DDI1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDDI1
EVEXDDI1
GoPubMedDDI1
iHOPDDI1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:01:11 CET 2017

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