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DDIT4L (DNA damage inducible transcript 4 like)

Identity

Alias_namesDNA-damage-inducible transcript 4-like
Alias_symbol (synonym)REDD2
Rtp801L
Other alias
HGNC (Hugo) DDIT4L
LocusID (NCBI) 115265
Atlas_Id 62351
Location 4q24  [Link to chromosome band 4q24]
Location_base_pair Starts at 100185870 and ends at 100190498 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DDIT4L   30555
Cards
Entrez_Gene (NCBI)DDIT4L  115265  DNA damage inducible transcript 4 like
AliasesREDD2; Rtp801L
GeneCards (Weizmann)DDIT4L
Ensembl hg19 (Hinxton)ENSG00000145358 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145358 [Gene_View]  chr4:100185870-100190498 [Contig_View]  DDIT4L [Vega]
ICGC DataPortalENSG00000145358
TCGA cBioPortalDDIT4L
AceView (NCBI)DDIT4L
Genatlas (Paris)DDIT4L
WikiGenes115265
SOURCE (Princeton)DDIT4L
Genetics Home Reference (NIH)DDIT4L
Genomic and cartography
GoldenPath hg38 (UCSC)DDIT4L  -     chr4:100185870-100190498 -  4q24   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DDIT4L  -     4q24   [Description]    (hg19-Feb_2009)
EnsemblDDIT4L - 4q24 [CytoView hg19]  DDIT4L - 4q24 [CytoView hg38]
Mapping of homologs : NCBIDDIT4L [Mapview hg19]  DDIT4L [Mapview hg38]
OMIM607730   
Gene and transcription
Genbank (Entrez)AK094236 AK312926 AL832277 BC013592 DB208869
RefSeq transcript (Entrez)NM_145244
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DDIT4L
Cluster EST : UnigeneHs.480378 [ NCBI ]
CGAP (NCI)Hs.480378
Alternative Splicing GalleryENSG00000145358
Gene ExpressionDDIT4L [ NCBI-GEO ]   DDIT4L [ EBI - ARRAY_EXPRESS ]   DDIT4L [ SEEK ]   DDIT4L [ MEM ]
Gene Expression Viewer (FireBrowse)DDIT4L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)115265
GTEX Portal (Tissue expression)DDIT4L
Human Protein AtlasENSG00000145358-DDIT4L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96D03   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96D03  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96D03
Splice isoforms : SwissVarQ96D03
PhosPhoSitePlusQ96D03
Domains : Interpro (EBI)RTP801-like   
Domain families : Pfam (Sanger)RTP801_C (PF07809)   
Domain families : Pfam (NCBI)pfam07809   
Conserved Domain (NCBI)DDIT4L
DMDM Disease mutations115265
Blocks (Seattle)DDIT4L
SuperfamilyQ96D03
Human Protein Atlas [tissue]ENSG00000145358-DDIT4L [tissue]
Peptide AtlasQ96D03
HPRD09663
IPIIPI00060544   IPI00966283   IPI00965462   
Protein Interaction databases
DIP (DOE-UCLA)Q96D03
IntAct (EBI)Q96D03
FunCoupENSG00000145358
BioGRIDDDIT4L
STRING (EMBL)DDIT4L
ZODIACDDIT4L
Ontologies - Pathways
QuickGOQ96D03
Ontology : AmiGOprotein binding  cytoplasm  negative regulation of signal transduction  
Ontology : EGO-EBIprotein binding  cytoplasm  negative regulation of signal transduction  
NDEx NetworkDDIT4L
Atlas of Cancer Signalling NetworkDDIT4L
Wikipedia pathwaysDDIT4L
Orthology - Evolution
OrthoDB115265
GeneTree (enSembl)ENSG00000145358
Phylogenetic Trees/Animal Genes : TreeFamDDIT4L
HOVERGENQ96D03
HOGENOMQ96D03
Homologs : HomoloGeneDDIT4L
Homology/Alignments : Family Browser (UCSC)DDIT4L
Gene fusions - Rearrangements
Tumor Fusion PortalDDIT4L
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDDIT4L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DDIT4L
dbVarDDIT4L
ClinVarDDIT4L
1000_GenomesDDIT4L 
Exome Variant ServerDDIT4L
ExAC (Exome Aggregation Consortium)ENSG00000145358
GNOMAD BrowserENSG00000145358
Genetic variants : HAPMAP115265
Genomic Variants (DGV)DDIT4L [DGVbeta]
DECIPHERDDIT4L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDDIT4L 
Mutations
ICGC Data PortalDDIT4L 
TCGA Data PortalDDIT4L 
Broad Tumor PortalDDIT4L
OASIS PortalDDIT4L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDDIT4L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDDIT4L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DDIT4L
DgiDB (Drug Gene Interaction Database)DDIT4L
DoCM (Curated mutations)DDIT4L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DDIT4L (select a term)
intoGenDDIT4L
Cancer3DDDIT4L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607730   
Orphanet
DisGeNETDDIT4L
MedgenDDIT4L
Genetic Testing Registry DDIT4L
NextProtQ96D03 [Medical]
TSGene115265
GENETestsDDIT4L
Target ValidationDDIT4L
Huge Navigator DDIT4L [HugePedia]
snp3D : Map Gene to Disease115265
BioCentury BCIQDDIT4L
ClinGenDDIT4L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD115265
Chemical/Pharm GKB GenePA128394749
Clinical trialDDIT4L
Miscellaneous
canSAR (ICR)DDIT4L (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDDIT4L
EVEXDDIT4L
GoPubMedDDIT4L
iHOPDDIT4L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:09:47 CET 2017

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