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DDR1-AS1 (DDR1 antisense RNA 1 (head to head))

Identity

Alias_namesTIGD1L
tigger transposable element derived 1-like
DDR1 antisense RNA 1 (non-protein coding)
DDR1 antisense RNA 1
Alias_symbol (synonym)bPG70P20.2
bCX111D4.7
bQB10J12.1
Other alias
HGNC (Hugo) DDR1-AS1
LocusID (NCBI) 414771
Atlas_Id 62354
Location 6_GL000255v2_alt  [Link to chromosome band 6]
Location_base_pair Starts at 2122171 and ends at 2131089 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)DDR1-AS1   28694
Cards
Entrez_Gene (NCBI)DDR1-AS1  414771  DDR1 antisense RNA 1 (head to head)
AliasesTIGD1L; bCX111D4.7; bPG70P20.2; bQB10J12.1
GeneCards (Weizmann)DDR1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr6_GL000255v2_alt:2122171-2131089 [Contig_View]  DDR1-AS1 [Vega]
TCGA cBioPortalDDR1-AS1
AceView (NCBI)DDR1-AS1
Genatlas (Paris)DDR1-AS1
WikiGenes414771
SOURCE (Princeton)DDR1-AS1
Genetics Home Reference (NIH)DDR1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)DDR1-AS1  -     chr6_GL000255v2_alt:2122171-2131089 -  6_GL000255v2_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DDR1-AS1  -     6_GL000255v2_alt   [Description]    (hg19-Feb_2009)
EnsemblDDR1-AS1 - 6_GL000255v2_alt [CytoView hg19]  DDR1-AS1 - 6_GL000255v2_alt [CytoView hg38]
Mapping of homologs : NCBIDDR1-AS1 [Mapview hg19]  DDR1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL137624
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DDR1-AS1
Gene ExpressionDDR1-AS1 [ NCBI-GEO ]   DDR1-AS1 [ EBI - ARRAY_EXPRESS ]   DDR1-AS1 [ SEEK ]   DDR1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)DDR1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)414771
GTEX Portal (Tissue expression)DDR1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DDR1-AS1
DMDM Disease mutations414771
Blocks (Seattle)DDR1-AS1
Protein Interaction databases
BioGRIDDDR1-AS1
STRING (EMBL)DDR1-AS1
ZODIACDDR1-AS1
Ontologies - Pathways
Huge Navigator DDR1-AS1 [HugePedia]
snp3D : Map Gene to Disease414771
BioCentury BCIQDDR1-AS1
ClinGenDDR1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD414771
Chemical/Pharm GKB GenePA134922682
Clinical trialDDR1-AS1
Miscellaneous
canSAR (ICR)DDR1-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineDDR1-AS1
EVEXDDR1-AS1
GoPubMedDDR1-AS1
iHOPDDR1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:13:44 CET 2017

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