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DDTL (D-dopachrome tautomerase like)

Identity

Other aliasKB-226F1.2
HGNC (Hugo) DDTL
LocusID (NCBI) 100037417
Atlas_Id 62356
Location 22q11.23  [Link to chromosome band 22q11]
Location_base_pair Starts at 23966838 and ends at 23972559 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
DDTL (22q11.23) / CABIN1 (22q11.23)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DDTL   33446
Cards
Entrez_Gene (NCBI)DDTL  100037417  D-dopachrome tautomerase like
AliasesKB-226F1.2
GeneCards (Weizmann)DDTL
Ensembl hg19 (Hinxton)ENSG00000099974 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000099974 [Gene_View]  chr22:23966838-23972559 [Contig_View]  DDTL [Vega]
ICGC DataPortalENSG00000099974
TCGA cBioPortalDDTL
AceView (NCBI)DDTL
Genatlas (Paris)DDTL
WikiGenes100037417
SOURCE (Princeton)DDTL
Genetics Home Reference (NIH)DDTL
Genomic and cartography
GoldenPath hg38 (UCSC)DDTL  -     chr22:23966838-23972559 +  22q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DDTL  -     22q11.23   [Description]    (hg19-Feb_2009)
EnsemblDDTL - 22q11.23 [CytoView hg19]  DDTL - 22q11.23 [CytoView hg38]
Mapping of homologs : NCBIDDTL [Mapview hg19]  DDTL [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI686044 AK296110 AK296189 AK298326 DB157727
RefSeq transcript (Entrez)NM_001084393
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_187633
Consensus coding sequences : CCDS (NCBI)DDTL
Cluster EST : UnigeneHs.744172 [ NCBI ]
CGAP (NCI)Hs.744172
Alternative Splicing GalleryENSG00000099974
Gene ExpressionDDTL [ NCBI-GEO ]   DDTL [ EBI - ARRAY_EXPRESS ]   DDTL [ SEEK ]   DDTL [ MEM ]
Gene Expression Viewer (FireBrowse)DDTL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100037417
GTEX Portal (Tissue expression)DDTL
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NHG4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NHG4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NHG4
Splice isoforms : SwissVarA6NHG4
Catalytic activity : Enzyme4.1.1.- [ Enzyme-Expasy ]   4.1.1.-4.1.1.- [ IntEnz-EBI ]   4.1.1.- [ BRENDA ]   4.1.1.- [ KEGG ]   
PhosPhoSitePlusA6NHG4
Domaine pattern : Prosite (Expaxy)MIF (PS01158)   
Domains : Interpro (EBI)Macrophage_inhib_fac    Macrophage_inhib_fac_CS    Tautomerase/MIF_sf   
Domain families : Pfam (Sanger)MIF (PF01187)   
Domain families : Pfam (NCBI)pfam01187   
Domain structure : Prodom (Prabi Lyon)Macrophage_inhib_fac (PD004816)   
Conserved Domain (NCBI)DDTL
DMDM Disease mutations100037417
Blocks (Seattle)DDTL
SuperfamilyA6NHG4
Human Protein AtlasENSG00000099974
Peptide AtlasA6NHG4
IPIIPI00472043   
Protein Interaction databases
DIP (DOE-UCLA)A6NHG4
IntAct (EBI)A6NHG4
FunCoupENSG00000099974
BioGRIDDDTL
STRING (EMBL)DDTL
ZODIACDDTL
Ontologies - Pathways
QuickGOA6NHG4
Ontology : AmiGOcytoplasm  lyase activity  extracellular exosome  
Ontology : EGO-EBIcytoplasm  lyase activity  extracellular exosome  
NDEx NetworkDDTL
Atlas of Cancer Signalling NetworkDDTL
Wikipedia pathwaysDDTL
Orthology - Evolution
OrthoDB100037417
GeneTree (enSembl)ENSG00000099974
Phylogenetic Trees/Animal Genes : TreeFamDDTL
HOVERGENA6NHG4
HOGENOMA6NHG4
Homologs : HomoloGeneDDTL
Homology/Alignments : Family Browser (UCSC)DDTL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDDTL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DDTL
dbVarDDTL
ClinVarDDTL
1000_GenomesDDTL 
Exome Variant ServerDDTL
ExAC (Exome Aggregation Consortium)DDTL (select the gene name)
Genetic variants : HAPMAP100037417
Genomic Variants (DGV)DDTL [DGVbeta]
DECIPHERDDTL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDDTL 
Mutations
ICGC Data PortalDDTL 
TCGA Data PortalDDTL 
Broad Tumor PortalDDTL
OASIS PortalDDTL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDDTL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDDTL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DDTL
DgiDB (Drug Gene Interaction Database)DDTL
DoCM (Curated mutations)DDTL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DDTL (select a term)
intoGenDDTL
Cancer3DDDTL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDDTL
Genetic Testing Registry DDTL
NextProtA6NHG4 [Medical]
TSGene100037417
GENETestsDDTL
Target ValidationDDTL
Huge Navigator DDTL [HugePedia]
snp3D : Map Gene to Disease100037417
BioCentury BCIQDDTL
ClinGenDDTL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100037417
Chemical/Pharm GKB GenePA162383433
Clinical trialDDTL
Miscellaneous
canSAR (ICR)DDTL (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDDTL
EVEXDDTL
GoPubMedDDTL
iHOPDDTL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:27 CEST 2017

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