Atlas of Genetics and Cytogenetics in Oncology and Haematology


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DDX11L1 (DEAD/H-box helicase 11 like 1)

Identity

Alias_namesDEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 like 1
DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 1
Other alias-
HGNC (Hugo) DDX11L1
LocusID (NCBI) 100287102
Atlas_Id 62358
Location 1p36.33  [Link to chromosome band 1p36]
Location_base_pair Starts at 11874 and ends at 14409 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DDX11L1   37102
Cards
Entrez_Gene (NCBI)DDX11L1  100287102  DEAD/H-box helicase 11 like 1
Aliases
GeneCards (Weizmann)DDX11L1
Ensembl hg19 (Hinxton)ENSG00000223972 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223972 [Gene_View]  chr1:11874-14409 [Contig_View]  DDX11L1 [Vega]
ICGC DataPortalENSG00000223972
TCGA cBioPortalDDX11L1
AceView (NCBI)DDX11L1
Genatlas (Paris)DDX11L1
WikiGenes100287102
SOURCE (Princeton)DDX11L1
Genetics Home Reference (NIH)DDX11L1
Genomic and cartography
GoldenPath hg38 (UCSC)DDX11L1  -     chr1:11874-14409 +  1p36.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DDX11L1  -     1p36.33   [Description]    (hg19-Feb_2009)
EnsemblDDX11L1 - 1p36.33 [CytoView hg19]  DDX11L1 - 1p36.33 [CytoView hg38]
Mapping of homologs : NCBIDDX11L1 [Mapview hg19]  DDX11L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AM992871 BC032353 BC070227
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DDX11L1
Cluster EST : UnigeneHs.714157 [ NCBI ]
CGAP (NCI)Hs.714157
Alternative Splicing GalleryENSG00000223972
Gene ExpressionDDX11L1 [ NCBI-GEO ]   DDX11L1 [ EBI - ARRAY_EXPRESS ]   DDX11L1 [ SEEK ]   DDX11L1 [ MEM ]
Gene Expression Viewer (FireBrowse)DDX11L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100287102
GTEX Portal (Tissue expression)DDX11L1
Human Protein AtlasENSG00000223972-DDX11L1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DDX11L1
DMDM Disease mutations100287102
Blocks (Seattle)DDX11L1
Human Protein Atlas [tissue]ENSG00000223972-DDX11L1 [tissue]
Protein Interaction databases
FunCoupENSG00000223972
BioGRIDDDX11L1
STRING (EMBL)DDX11L1
ZODIACDDX11L1
Ontologies - Pathways
Huge Navigator DDX11L1 [HugePedia]
snp3D : Map Gene to Disease100287102
BioCentury BCIQDDX11L1
ClinGenDDX11L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100287102
Chemical/Pharm GKB GenePA165751228
Clinical trialDDX11L1
Miscellaneous
canSAR (ICR)DDX11L1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDDX11L1
EVEXDDX11L1
GoPubMedDDX11L1
iHOPDDX11L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:44:11 CET 2017

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