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DDX27 (DEAD-box helicase 27)

Identity

Alias (NCBI)DRS1
Drs1p
HSPC259
PP3241
RHLP
dJ686N3.1
HGNC (Hugo) DDX27
HGNC Alias symbdJ686N3.1
DRS1
HGNC Previous nameDEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 27
 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
LocusID (NCBI) 55661
Atlas_Id 47232
Location 20q13.13  [Link to chromosome band 20q13]
Location_base_pair Starts at 49219295 and ends at 49244077 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABL1 (9q34.12) / DDX27 (20q13.13)ADNP (20q13.13) / DDX27 (20q13.13)COL6A2 (21q22.3) / DDX27 (20q13.13)
COX6C (8q22.2) / DDX27 (20q13.13)CSDE1 (1p13.2) / DDX27 (20q13.13)CTTN (11q13.3) / DDX27 (20q13.13)
DDX27 (20q13.13) / DDX27 (20q13.13)DDX27 (20q13.13) / EIF6 (20q11.22)DDX27 (20q13.13) / PLXNA2 (1q32.2)
GLUL (1q25.3) / DDX27 (20q13.13)GPNMB (7p15.3) / DDX27 (20q13.13)GSN (9q33.2) / DDX27 (20q13.13)
HDLBP (2q37.3) / DDX27 (20q13.13)HSPH1 (13q12.3) / DDX27 (20q13.13)LONP1 (19p13.3) / DDX27 (20q13.13)
MTSS1 (8q24.13) / DDX27 (20q13.13)MXRA8 (1p36.33) / DDX27 (20q13.13)NCOR2 (12q24.31) / DDX27 (20q13.13)
PERP (6q23.3) / DDX27 (20q13.13)SAMHD1 (20q11.23) / DDX27 (20q13.13)SLC25A3 (12q23.1) / DDX27 (20q13.13)
STOM (9q33.2) / DDX27 (20q13.13)VEGFA (6p21.1) / DDX27 (20q13.13)ABL1 9q34.12 / DDX27 20q13.13
ADNP 20q13.13 / DDX27 20q13.13COL6A2 21q22.3 / DDX27 20q13.13COX6C 8q22.2 / DDX27 20q13.13
CSDE1 1p13.2 / DDX27 20q13.13CTTN 11q13.3 / DDX27 20q13.13GLUL 1q25.3 / DDX27 20q13.13
GPNMB 7p15.3 / DDX27 20q13.13GSN 9q33.2 / DDX27 20q13.13HDLBP 2q37.3 / DDX27 20q13.13
HSPH1 13q12.3 / DDX27 20q13.13LONP1 19p13.3 / DDX27 20q13.13MTSS1 8q24.13 / DDX27 20q13.13
MXRA8 1p36.33 / DDX27 20q13.13NCOR2 12q24.31 / DDX27 20q13.13PERP 6q23.3 / DDX27 20q13.13
SAMHD1 20q11.23 / DDX27 20q13.13SLC25A3 12q23.1 / DDX27 20q13.13STOM 9q33.2 / DDX27 20q13.13
VEGFA 6p21.1 / DDX27 20q13.13

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)DDX27   15837
Cards
Entrez_Gene (NCBI)DDX27    DEAD-box helicase 27
AliasesDRS1; Drs1p; HSPC259; PP3241; 
RHLP; dJ686N3.1
GeneCards (Weizmann)DDX27
Ensembl hg19 (Hinxton)ENSG00000124228 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000124228 [Gene_View]  ENSG00000124228 [Sequence]  chr20:49219295-49244077 [Contig_View]  DDX27 [Vega]
ICGC DataPortalENSG00000124228
TCGA cBioPortalDDX27
AceView (NCBI)DDX27
Genatlas (Paris)DDX27
SOURCE (Princeton)DDX27
Genetics Home Reference (NIH)DDX27
Genomic and cartography
GoldenPath hg38 (UCSC)DDX27  -     chr20:49219295-49244077 +  20q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DDX27  -     20q13.13   [Description]    (hg19-Feb_2009)
GoldenPathDDX27 - 20q13.13 [CytoView hg19]  DDX27 - 20q13.13 [CytoView hg38]
ImmunoBaseENSG00000124228
genome Data Viewer NCBIDDX27 [Mapview hg19]  
OMIM616621   
Gene and transcription
Genbank (Entrez)AF193054 AF336851 AK000603 AK022979 AK025891
RefSeq transcript (Entrez)NM_001348187 NM_017895
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DDX27
Alternative Splicing GalleryENSG00000124228
Gene ExpressionDDX27 [ NCBI-GEO ]   DDX27 [ EBI - ARRAY_EXPRESS ]   DDX27 [ SEEK ]   DDX27 [ MEM ]
Gene Expression Viewer (FireBrowse)DDX27 [ Firebrowse - Broad ]
GenevisibleExpression of DDX27 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55661
GTEX Portal (Tissue expression)DDX27
Human Protein AtlasENSG00000124228-DDX27 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DDX27
Blocks (Seattle)DDX27
Human Protein Atlas [tissue]ENSG00000124228-DDX27 [tissue]
HPRD10859
IPIIPI00293078   IPI01011137   
Protein Interaction databases
BioGRIDDDX27
STRING (EMBL)DDX27
ZODIACDDX27
Ontologies - Pathways
Litterature
PubMed75 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDDX27
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 25 19:18:07 CET 2021

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