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DDX51 (DEAD-box helicase 51)

Identity

Alias (NCBI)-
HGNC (Hugo) DDX51
HGNC Previous nameDEAD (Asp-Glu-Ala-Asp) box polypeptide 51
LocusID (NCBI) 317781
Atlas_Id 46985
Location 12q24.33  [Link to chromosome band 12q24]
Location_base_pair Starts at 132136595 and ends at 132144319 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)DDX51   20082
Cards
Entrez_Gene (NCBI)DDX51    DEAD-box helicase 51
Aliases
GeneCards (Weizmann)DDX51
Ensembl hg19 (Hinxton)ENSG00000185163 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000185163 [Gene_View]  ENSG00000185163 [Sequence]  chr12:132136595-132144319 [Contig_View]  DDX51 [Vega]
ICGC DataPortalENSG00000185163
TCGA cBioPortalDDX51
AceView (NCBI)DDX51
Genatlas (Paris)DDX51
SOURCE (Princeton)DDX51
Genetics Home Reference (NIH)DDX51
Genomic and cartography
GoldenPath hg38 (UCSC)DDX51  -     chr12:132136595-132144319 -  12q24.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DDX51  -     12q24.33   [Description]    (hg19-Feb_2009)
GoldenPathDDX51 - 12q24.33 [CytoView hg19]  DDX51 - 12q24.33 [CytoView hg38]
ImmunoBaseENSG00000185163
Genome Data Viewer NCBIDDX51 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB593157 AK097078 AL079273 BC012461 BC029279
RefSeq transcript (Entrez)NM_175066
Consensus coding sequences : CCDS (NCBI)DDX51
Gene ExpressionDDX51 [ NCBI-GEO ]   DDX51 [ EBI - ARRAY_EXPRESS ]   DDX51 [ SEEK ]   DDX51 [ MEM ]
Gene Expression Viewer (FireBrowse)DDX51 [ Firebrowse - Broad ]
GenevisibleExpression of DDX51 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)317781
GTEX Portal (Tissue expression)DDX51
Human Protein AtlasENSG00000185163-DDX51 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N8A6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N8A6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N8A6
Catalytic activity : Enzyme3.6.4.13 [ Enzyme-Expasy ]   3.6.4.133.6.4.13 [ IntEnz-EBI ]   3.6.4.13 [ BRENDA ]   3.6.4.13 [ KEGG ]   [ MEROPS ]
PhosPhoSitePlusQ8N8A6
Domaine pattern : Prosite (Expaxy)DEAD_ATP_HELICASE (PS00039)    HELICASE_ATP_BIND_1 (PS51192)    HELICASE_CTER (PS51194)   
Domains : Interpro (EBI)DEAD/DEAH_box_helicase_dom    Helicase_ATP-bd    Helicase_C    P-loop_NTPase    RNA-helicase_DEAD-box_CS   
Domain families : Pfam (Sanger)DEAD (PF00270)    Helicase_C (PF00271)   
Domain families : Pfam (NCBI)pfam00270    pfam00271   
Domain families : Smart (EMBL)DEXDc (SM00487)  HELICc (SM00490)  
Conserved Domain (NCBI)DDX51
SuperfamilyQ8N8A6
AlphaFold pdb e-kbQ8N8A6   
Human Protein Atlas [tissue]ENSG00000185163-DDX51 [tissue]
HPRD10865
Protein Interaction databases
DIP (DOE-UCLA)Q8N8A6
IntAct (EBI)Q8N8A6
BioGRIDDDX51
STRING (EMBL)DDX51
ZODIACDDX51
Ontologies - Pathways
QuickGOQ8N8A6
Ontology : AmiGORNA binding  RNA helicase activity  ATP binding  nucleus  nucleolus  rRNA processing  membrane  ATP hydrolysis activity  
Ontology : EGO-EBIRNA binding  RNA helicase activity  ATP binding  nucleus  nucleolus  rRNA processing  membrane  ATP hydrolysis activity  
NDEx NetworkDDX51
Atlas of Cancer Signalling NetworkDDX51
Wikipedia pathwaysDDX51
Orthology - Evolution
OrthoDB317781
GeneTree (enSembl)ENSG00000185163
Phylogenetic Trees/Animal Genes : TreeFamDDX51
Homologs : HomoloGeneDDX51
Homology/Alignments : Family Browser (UCSC)DDX51
Gene fusions - Rearrangements
Fusion : QuiverDDX51
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDDX51 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DDX51
dbVarDDX51
ClinVarDDX51
MonarchDDX51
1000_GenomesDDX51 
Exome Variant ServerDDX51
GNOMAD BrowserENSG00000185163
Varsome BrowserDDX51
ACMGDDX51 variants
VarityQ8N8A6
Genomic Variants (DGV)DDX51 [DGVbeta]
DECIPHERDDX51 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDDX51 
Mutations
ICGC Data PortalDDX51 
TCGA Data PortalDDX51 
Broad Tumor PortalDDX51
OASIS PortalDDX51 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDDX51  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DDDX51
Mutations and Diseases : HGMDDDX51
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaDDX51
DgiDB (Drug Gene Interaction Database)DDX51
DoCM (Curated mutations)DDX51
CIViC (Clinical Interpretations of Variants in Cancer)DDX51
Cancer3DDDX51
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETDDX51
MedgenDDX51
Genetic Testing Registry DDX51
NextProtQ8N8A6 [Medical]
GENETestsDDX51
Target ValidationDDX51
Huge Navigator DDX51 [HugePedia]
ClinGenDDX51
Clinical trials, drugs, therapy
MyCancerGenomeDDX51
Protein Interactions : CTDDDX51
Pharm GKB GenePA134974036
PharosQ8N8A6
Clinical trialDDX51
Miscellaneous
canSAR (ICR)DDX51
HarmonizomeDDX51
ARCHS4DDX51
DataMed IndexDDX51
Probes
Litterature
PubMed41 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXDDX51
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 12:30:15 CET 2022

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