DDX54 (DEAD-box helicase 54)

2007-04-01  

Identity

HGNC
DDX54
LOCATION
12q24.13
LOCUSID
79039
ALIAS
DP97
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 79039
MIM: 611665
HGNC: 20084
Ensembl: ENSG00000123064

Variants:

dbSNP: 79039
ClinVar: 79039
TCGA: ENSG00000123064
COSMIC: DDX54

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000123064ENST00000306014Q8TDD1
ENSG00000123064ENST00000314045Q8TDD1
ENSG00000123064ENST00000546898H0YHH7
ENSG00000123064ENST00000551344H0YHZ9
ENSG00000123064ENST00000552375F8VRX4

Expression (GTEx)

0
10
20
30
40
50
60
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
170819832006Global, in vivo, and site-specific phosphorylation dynamics in signaling networks.1155
156354132005Nucleolar proteome dynamics.386
117902982002Directed proteomic analysis of the human nucleolus.329
124298492002Functional proteomic analysis of human nucleolus.152
162600422006Rapid identification of 14-3-3-binding proteins by protein microarray analysis.16
232392302013A DEAD-box RNA helicase Ddx54 protein in oligodendrocytes is indispensable for myelination in the central nervous system.6
229104112012DP97, a DEAD box DNA/RNA helicase, is a target gene-selective co-regulator of the constitutive androstane receptor.2
312568772019Paralog Studies Augment Gene Discovery: DDX and DHX Genes.2

Citation

Dessen P

DDX54 (DEAD-box helicase 54)

Atlas Genet Cytogenet Oncol Haematol. 2007-04-01

Online version: http://atlasgeneticsoncology.org/gene/46851/ddx54