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DEFA11P (defensin alpha 11, pseudogene)

Identity

Alias_namesdefensin, alpha 11 pseudogene
Alias_symbol (synonym)DEFAP3
Other alias
HGNC (Hugo) DEFA11P
LocusID (NCBI) 724068
Atlas_Id 62381
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 7028601 and ends at 7029489 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DEFA11P   33354
Cards
Entrez_Gene (NCBI)DEFA11P  724068  defensin alpha 11, pseudogene
AliasesDEFAP3
GeneCards (Weizmann)DEFA11P
Ensembl hg19 (Hinxton)ENSG00000234178 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234178 [Gene_View]  chr8:7028601-7029489 [Contig_View]  DEFA11P [Vega]
ICGC DataPortalENSG00000234178
TCGA cBioPortalDEFA11P
AceView (NCBI)DEFA11P
Genatlas (Paris)DEFA11P
WikiGenes724068
SOURCE (Princeton)DEFA11P
Genetics Home Reference (NIH)DEFA11P
Genomic and cartography
GoldenPath hg38 (UCSC)DEFA11P  -     chr8:7028601-7029489 -  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEFA11P  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblDEFA11P - 8p23.1 [CytoView hg19]  DEFA11P - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBIDEFA11P [Mapview hg19]  DEFA11P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY746436
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEFA11P
Cluster EST : UnigeneHs.690600 [ NCBI ]
CGAP (NCI)Hs.690600
Alternative Splicing GalleryENSG00000234178
Gene ExpressionDEFA11P [ NCBI-GEO ]   DEFA11P [ EBI - ARRAY_EXPRESS ]   DEFA11P [ SEEK ]   DEFA11P [ MEM ]
Gene Expression Viewer (FireBrowse)DEFA11P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)724068
GTEX Portal (Tissue expression)DEFA11P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DEFA11P
DMDM Disease mutations724068
Blocks (Seattle)DEFA11P
Human Protein AtlasENSG00000234178
Protein Interaction databases
FunCoupENSG00000234178
BioGRIDDEFA11P
STRING (EMBL)DEFA11P
ZODIACDEFA11P
Ontologies - Pathways
Huge Navigator DEFA11P [HugePedia]
snp3D : Map Gene to Disease724068
BioCentury BCIQDEFA11P
ClinGenDEFA11P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD724068
Clinical trialDEFA11P
Miscellaneous
canSAR (ICR)DEFA11P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEFA11P
EVEXDEFA11P
GoPubMedDEFA11P
iHOPDEFA11P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:06:01 CEST 2017

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