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DEFA8P (defensin alpha 8, pseudogene)

Identity

Alias_namesdefensin, alpha 8 pseudogene
Alias_symbol (synonym)DEFAP1
Other alias
HGNC (Hugo) DEFA8P
LocusID (NCBI) 449491
Atlas_Id 62384
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 6950726 and ends at 6951599 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DEFA8P   31799
Cards
Entrez_Gene (NCBI)DEFA8P  449491  defensin alpha 8, pseudogene
AliasesDEFAP1
GeneCards (Weizmann)DEFA8P
Ensembl hg19 (Hinxton)ENSG00000223629 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223629 [Gene_View]  chr8:6950726-6951599 [Contig_View]  DEFA8P [Vega]
ICGC DataPortalENSG00000223629
TCGA cBioPortalDEFA8P
AceView (NCBI)DEFA8P
Genatlas (Paris)DEFA8P
WikiGenes449491
SOURCE (Princeton)DEFA8P
Genetics Home Reference (NIH)DEFA8P
Genomic and cartography
GoldenPath hg38 (UCSC)DEFA8P  -     chr8:6950726-6951599 -  8p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEFA8P  -     8p23.1   [Description]    (hg19-Feb_2009)
EnsemblDEFA8P - 8p23.1 [CytoView hg19]  DEFA8P - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBIDEFA8P [Mapview hg19]  DEFA8P [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY746433
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEFA8P
Cluster EST : UnigeneHs.627154 [ NCBI ]
CGAP (NCI)Hs.627154
Alternative Splicing GalleryENSG00000223629
Gene ExpressionDEFA8P [ NCBI-GEO ]   DEFA8P [ EBI - ARRAY_EXPRESS ]   DEFA8P [ SEEK ]   DEFA8P [ MEM ]
Gene Expression Viewer (FireBrowse)DEFA8P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)449491
GTEX Portal (Tissue expression)DEFA8P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DEFA8P
DMDM Disease mutations449491
Blocks (Seattle)DEFA8P
Human Protein AtlasENSG00000223629
IPIIPI00745815   
Protein Interaction databases
FunCoupENSG00000223629
BioGRIDDEFA8P
STRING (EMBL)DEFA8P
ZODIACDEFA8P
Ontologies - Pathways
Huge Navigator DEFA8P [HugePedia]
snp3D : Map Gene to Disease449491
BioCentury BCIQDEFA8P
ClinGenDEFA8P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD449491
Chemical/Pharm GKB GenePA134967483
Clinical trialDEFA8P
Miscellaneous
canSAR (ICR)DEFA8P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEFA8P
EVEXDEFA8P
GoPubMedDEFA8P
iHOPDEFA8P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:45:33 CEST 2017

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