Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

DEFB108A (defensin beta 108A)

Identity

Alias_namesDEFB108
DEFB108P1
defensin, beta 108
defensin, beta 108, pseudogene 1
defensin beta 108 pseudogene 1
Alias_symbol (synonym)DEFB-8
Other alias
HGNC (Hugo) DEFB108A
LocusID (NCBI) 503694
Atlas_Id 79516
Location 8_KI270813v1_alt  [Link to chromosome band 8]
Location_base_pair Starts at 55880 and ends at 60174 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)DEFB108A   18089
Cards
Entrez_Gene (NCBI)DEFB108A  503694  defensin beta 108A
AliasesDEFB-8; DEFB108; DEFB108P1
GeneCards (Weizmann)DEFB108A
Ensembl hg19 (Hinxton)ENSG00000229907 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000229907 [Gene_View]  chr8_KI270813v1_alt:55880-60174 [Contig_View]  DEFB108A [Vega]
ICGC DataPortalENSG00000229907
TCGA cBioPortalDEFB108A
AceView (NCBI)DEFB108A
Genatlas (Paris)DEFB108A
WikiGenes503694
SOURCE (Princeton)DEFB108A
Genetics Home Reference (NIH)DEFB108A
Genomic and cartography
GoldenPath hg38 (UCSC)DEFB108A  -     chr8_KI270813v1_alt:55880-60174 +  8_KI270813v1_alt   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEFB108A  -     8_KI270813v1_alt   [Description]    (hg19-Feb_2009)
EnsemblDEFB108A - 8_KI270813v1_alt [CytoView hg19]  DEFB108A - 8_KI270813v1_alt [CytoView hg38]
Mapping of homologs : NCBIDEFB108A [Mapview hg19]  DEFB108A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF540980
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEFB108A
Cluster EST : UnigeneHs.583890 [ NCBI ]
CGAP (NCI)Hs.583890
Alternative Splicing GalleryENSG00000229907
Gene ExpressionDEFB108A [ NCBI-GEO ]   DEFB108A [ EBI - ARRAY_EXPRESS ]   DEFB108A [ SEEK ]   DEFB108A [ MEM ]
Gene Expression Viewer (FireBrowse)DEFB108A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)503694
GTEX Portal (Tissue expression)DEFB108A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DEFB108A
DMDM Disease mutations503694
Blocks (Seattle)DEFB108A
Human Protein AtlasENSG00000229907
IPIIPI00853126   
Protein Interaction databases
FunCoupENSG00000229907
BioGRIDDEFB108A
STRING (EMBL)DEFB108A
ZODIACDEFB108A
Ontologies - Pathways
Huge Navigator DEFB108A [HugePedia]
snp3D : Map Gene to Disease503694
BioCentury BCIQDEFB108A
ClinGenDEFB108A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD503694
Chemical/Pharm GKB GenePA38485
Clinical trialDEFB108A
Miscellaneous
canSAR (ICR)DEFB108A (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEFB108A
EVEXDEFB108A
GoPubMedDEFB108A
iHOPDEFB108A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:06:03 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.