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DEFB117 (defensin beta 117 (pseudogene))

Identity

Alias_namesdefensin, beta 117
defensin, beta 117 (pseudogene)
Alias_symbol (synonym)DEFB-17
Other alias
HGNC (Hugo) DEFB117
LocusID (NCBI) 245931
Atlas_Id 62404
Location 20q11.21  [Link to chromosome band 20q11]
Location_base_pair Starts at 31360775 and ends at 31360903 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)DEFB117   18098
Cards
Entrez_Gene (NCBI)DEFB117  245931  defensin beta 117 (pseudogene)
AliasesDEFB-17
GeneCards (Weizmann)DEFB117
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:31360775-31360903 [Contig_View]  DEFB117 [Vega]
TCGA cBioPortalDEFB117
AceView (NCBI)DEFB117
Genatlas (Paris)DEFB117
WikiGenes245931
SOURCE (Princeton)DEFB117
Genetics Home Reference (NIH)DEFB117
Genomic and cartography
GoldenPath hg38 (UCSC)DEFB117  -     chr20:31360775-31360903 +  20q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEFB117  -     20q11.21   [Description]    (hg19-Feb_2009)
EnsemblDEFB117 - 20q11.21 [CytoView hg19]  DEFB117 - 20q11.21 [CytoView hg38]
Mapping of homologs : NCBIDEFB117 [Mapview hg19]  DEFB117 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DQ012021
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEFB117
Cluster EST : UnigeneHs.580702 [ NCBI ]
CGAP (NCI)Hs.580702
Gene ExpressionDEFB117 [ NCBI-GEO ]   DEFB117 [ EBI - ARRAY_EXPRESS ]   DEFB117 [ SEEK ]   DEFB117 [ MEM ]
Gene Expression Viewer (FireBrowse)DEFB117 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)245931
GTEX Portal (Tissue expression)DEFB117
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)DEFB117
DMDM Disease mutations245931
Blocks (Seattle)DEFB117
IPIIPI00658121   
Protein Interaction databases
BioGRIDDEFB117
STRING (EMBL)DEFB117
ZODIACDEFB117
Ontologies - Pathways
Huge Navigator DEFB117 [HugePedia]
snp3D : Map Gene to Disease245931
BioCentury BCIQDEFB117
ClinGenDEFB117
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD245931
Chemical/Pharm GKB GenePA38494
Clinical trialDEFB117
Miscellaneous
canSAR (ICR)DEFB117 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEFB117
EVEXDEFB117
GoPubMedDEFB117
iHOPDEFB117
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:45:38 CEST 2017

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