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DEFB132 (defensin beta 132)

Identity

Alias_namesdefensin, beta 132
Alias_symbol (synonym)RP5-1103G7.6
DEFB32
Other aliasBD-32
DEFB-32
HEL-75
KFLL827
UNQ827
HGNC (Hugo) DEFB132
LocusID (NCBI) 400830
Atlas_Id 62418
Location 20p13  [Link to chromosome band 20p13]
Location_base_pair Starts at 257736 and ends at 261095 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)DEFB132   33806
Cards
Entrez_Gene (NCBI)DEFB132  400830  defensin beta 132
AliasesBD-32; DEFB-32; DEFB32; HEL-75; 
KFLL827; UNQ827
GeneCards (Weizmann)DEFB132
Ensembl hg19 (Hinxton)ENSG00000186458 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000186458 [Gene_View]  chr20:257736-261095 [Contig_View]  DEFB132 [Vega]
ICGC DataPortalENSG00000186458
TCGA cBioPortalDEFB132
AceView (NCBI)DEFB132
Genatlas (Paris)DEFB132
WikiGenes400830
SOURCE (Princeton)DEFB132
Genetics Home Reference (NIH)DEFB132
Genomic and cartography
GoldenPath hg38 (UCSC)DEFB132  -     chr20:257736-261095 +  20p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)DEFB132  -     20p13   [Description]    (hg19-Feb_2009)
EnsemblDEFB132 - 20p13 [CytoView hg19]  DEFB132 - 20p13 [CytoView hg38]
Mapping of homologs : NCBIDEFB132 [Mapview hg19]  DEFB132 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF525932 AY358708 AY621329 BC137292 BC137293
RefSeq transcript (Entrez)NM_207469
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)DEFB132
Cluster EST : UnigeneHs.516819 [ NCBI ]
CGAP (NCI)Hs.516819
Alternative Splicing GalleryENSG00000186458
Gene ExpressionDEFB132 [ NCBI-GEO ]   DEFB132 [ EBI - ARRAY_EXPRESS ]   DEFB132 [ SEEK ]   DEFB132 [ MEM ]
Gene Expression Viewer (FireBrowse)DEFB132 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400830
GTEX Portal (Tissue expression)DEFB132
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7Z7B7   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7Z7B7  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7Z7B7
Splice isoforms : SwissVarQ7Z7B7
PhosPhoSitePlusQ7Z7B7
Domains : Interpro (EBI)Beta_defensin   
Domain families : Pfam (Sanger)Defensin_beta_2 (PF13841)   
Domain families : Pfam (NCBI)pfam13841   
Conserved Domain (NCBI)DEFB132
DMDM Disease mutations400830
Blocks (Seattle)DEFB132
SuperfamilyQ7Z7B7
Human Protein AtlasENSG00000186458
Peptide AtlasQ7Z7B7
HPRD16792
IPIIPI00385522   
Protein Interaction databases
DIP (DOE-UCLA)Q7Z7B7
IntAct (EBI)Q7Z7B7
FunCoupENSG00000186458
BioGRIDDEFB132
STRING (EMBL)DEFB132
ZODIACDEFB132
Ontologies - Pathways
QuickGOQ7Z7B7
Ontology : AmiGOextracellular region  defense response to bacterium  innate immune response  
Ontology : EGO-EBIextracellular region  defense response to bacterium  innate immune response  
NDEx NetworkDEFB132
Atlas of Cancer Signalling NetworkDEFB132
Wikipedia pathwaysDEFB132
Orthology - Evolution
OrthoDB400830
GeneTree (enSembl)ENSG00000186458
Phylogenetic Trees/Animal Genes : TreeFamDEFB132
HOVERGENQ7Z7B7
HOGENOMQ7Z7B7
Homologs : HomoloGeneDEFB132
Homology/Alignments : Family Browser (UCSC)DEFB132
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerDEFB132 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)DEFB132
dbVarDEFB132
ClinVarDEFB132
1000_GenomesDEFB132 
Exome Variant ServerDEFB132
ExAC (Exome Aggregation Consortium)DEFB132 (select the gene name)
Genetic variants : HAPMAP400830
Genomic Variants (DGV)DEFB132 [DGVbeta]
DECIPHERDEFB132 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisDEFB132 
Mutations
ICGC Data PortalDEFB132 
TCGA Data PortalDEFB132 
Broad Tumor PortalDEFB132
OASIS PortalDEFB132 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICDEFB132  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDDEFB132
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch DEFB132
DgiDB (Drug Gene Interaction Database)DEFB132
DoCM (Curated mutations)DEFB132 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)DEFB132 (select a term)
intoGenDEFB132
Cancer3DDEFB132(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenDEFB132
Genetic Testing Registry DEFB132
NextProtQ7Z7B7 [Medical]
TSGene400830
GENETestsDEFB132
Target ValidationDEFB132
Huge Navigator DEFB132 [HugePedia]
snp3D : Map Gene to Disease400830
BioCentury BCIQDEFB132
ClinGenDEFB132
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400830
Chemical/Pharm GKB GenePA162383557
Clinical trialDEFB132
Miscellaneous
canSAR (ICR)DEFB132 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineDEFB132
EVEXDEFB132
GoPubMedDEFB132
iHOPDEFB132
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:45:41 CEST 2017

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